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CLPTM1L
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:31.5 nTPM
HPA:31.5 nTPM
GTEx:35.4 nTPM
FANTOM5:19.6 Scaled Tags Per Million
Pig:33.1 nTPM
Mouse:73.5 nTPM
Allen mouse:0.2 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 31.5
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 24.4
2219 Male, age 76, both hemispheres 27.1
2586 Male, age 75, left hemisphere 26.4
2666 Male, age 74, left hemisphere 24.6
2411 Female, age 72, unknown 24.3
2828 Female, age 72, unknown 24.3
1830 Male, age 51, unknown 24.0
1827 Male, age 72, unknown 23.9
1833 Male, age 53, unknown 23.5
1870 Female, age 42, unknown 23.4
2019 Male, age 18, unknown 22.9
Dorsal raphe nucleus
nTPM: 23.5
2298 Female, age 72, unknown 24.5
2016 Female, age 72, unknown 24.1
2750 Male, age 76, both hemispheres 23.4
1828 Male, age 53, unknown 23.1
2047 Male, age 72, unknown 22.6
Inferior colliculus
nTPM: 23.0
1890 Male, age 53, unknown 23.9
2097 Female, age 72, unknown 23.8
1848 Female, age 42, unknown 22.9
2849 Male, age 72, unknown 21.4
Median raphe nucleus
nTPM: 22.5
2220 Male, age 76, midline 22.5
Pedunculopontine tegmental nucleus
nTPM: 22.3
2334 Male, age 80, both hemispheres 23.0
1921 Female, age 85, both hemispheres 22.9
2338 Male, age 61, both hemispheres 21.0
Periaquaductal grey, anterior
nTPM: 23.8
1947 Male, age 18, unknown 24.6
2502 Female, age 75, unknown 23.9
1795 Male, age 51, unknown 22.8
Periaquaductal grey, dorsal
nTPM: 23.1
1840 Male, age 53, unknown 25.4
2850 Male, age 76, both hemispheres 23.1
2464 Female, age 72, unknown 22.8
1831 Male, age 72, unknown 20.9
Periaquaductal grey, lateral
nTPM: 22.5
2140 Male, age 76, both hemispheres 22.7
2272 Male, age 74, both hemispheres 22.5
2053 Male, age 18, unknown 22.3
Pretectal area
nTPM: 22.8
2007 Male, age 72, unknown 25.9
1815 Male, age 53, unknown 24.2
1817 Female, age 42, unknown 23.5
1944 Female, age 72, unknown 23.5
2667 Female, age 75, unknown 23.1
1816 Male, age 51, unknown 22.5
2273 Male, age 74, both hemispheres 22.1
2825 Male, age 18, unknown 21.9
2224 Female, age 72, unknown 21.8
2316 Male, age 76, right hemisphere 21.6
2407 Male, age 75, both hemispheres 20.9
Red nucleus
nTPM: 22.9
2588 Male, age 74, left hemisphere 24.9
2584 Male, age 75, left hemisphere 24.0
1904 Male, age 53, unknown 23.7
2725 Female, age 75, unknown 23.5
1821 Female, age 72, unknown 23.3
2785 Male, age 18, unknown 23.1
2769 Male, age 72, unknown 22.7
1865 Male, age 51, unknown 22.6
1954 Female, age 42, unknown 22.4
2227 Male, age 72, unknown 22.2
2503 Female, age 72, unknown 21.8
2823 Male, age 76, right hemisphere 20.4
Substantia nigra
nTPM: 31.5
1916 Female, age 42, unknown 40.5
2241 Male, age 72, unknown 40.5
1851 Male, age 51, unknown 40.1
2409 Female, age 72, unknown 35.0
2699 Male, age 18, unknown 30.1
2665 Male, age 74, both hemispheres 26.7
1889 Female, age 72, unknown 26.4
1941 Male, age 53, unknown 26.3
2590 Female, age 75, unknown 25.4
2583 Male, age 75, right hemisphere 24.0
Superior colliculus
nTPM: 23.3
2668 Female, age 75, unknown 25.7
1796 Male, age 53, unknown 25.2
2261 Male, age 18, unknown 24.9
2664 Male, age 75, both hemispheres 23.8
2087 Female, age 72, unknown 23.0
2587 Male, age 74, left hemisphere 22.4
1839 Male, age 51, unknown 22.1
1895 Male, age 76, right hemisphere 22.1
1995 Male, age 72, unknown 22.0
1913 Female, age 42, unknown 21.7
Ventral tegmental area
nTPM: 29.3
2410 Female, age 72, unknown 38.0
1915 Female, age 42, unknown 35.3
2218 Male, age 76, both hemispheres 29.0
1942 Male, age 51, unknown 26.2
2021 Male, age 53, unknown 24.0
2223 Female, age 72, unknown 23.2

MIDBRAIN - GTEx RNA-seqi
Average nTPM 35.4
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 35.4
Samples: 139

Max nTPM: 67.3
Min nTPM: 18.9
Std nTPM: 11.4
Median nTPM: 33.2
GTEX-1B8L1-0011-R2a-SM-9OSVL 60-69 years, male 67.3
GTEX-15DYW-0011-R2b-SM-7KUKY 60-69 years, female 67.1
GTEX-1LH75-0011-R2b-SM-EYYWQ 50-59 years, female 65.4
GTEX-1EMGI-0011-R2b-SM-9OSVS 60-69 years, male 63.7
GTEX-13OW6-0011-R2a-SM-5L3HG 50-59 years, male 62.4
GTEX-12ZZX-0011-R2a-SM-5EGLG 40-49 years, female 61.6
GTEX-14BIN-0011-R2a-SM-5S2RJ 50-59 years, female 59.2
GTEX-13O3Q-0011-R2b-SM-5KM3K 50-59 years, male 58.8
GTEX-12WSD-0011-R2a-SM-5LZWB 60-69 years, female 58.5
GTEX-13O3O-0011-R2b-SM-5P9H1 60-69 years, female 57.1
GTEX-14BIM-0011-R2b-SM-69LQ6 60-69 years, female 56.0
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 19.6
FF:10158-103A5 76 years, female 19.6

MIDBRAIN - Pig RNA-seqi
Average nTPM 33.1
Pig sample Sample description nTPM
Midbrain
nTPM: 27.8
Samples: 4

Max nTPM: 32.0
Min nTPM: 24.7
Sample A Female 32.0
Sample B Female 27.1
Sample C Male 27.2
Sample D Male 24.7
Periaqueductal gray
nTPM: 23.4
Samples: 3

Max nTPM: 26.0
Min nTPM: 21.8
Sample B Female 22.4
Sample C Male 26.0
Sample D Male 21.8
Substantia nigra
nTPM: 33.1
Samples: 4

Max nTPM: 44.0
Min nTPM: 21.8
Sample A Female 44.0
Sample B Female 28.9
Sample C Male 37.8
Sample D Male 21.8
Superior colliculi
nTPM: 27.6
Samples: 4

Max nTPM: 32.7
Min nTPM: 23.4
Sample A Female 32.7
Sample B Female 27.7
Sample C Male 26.5
Sample D Male 23.4

MIDBRAIN - Mouse RNA-seqi
Average nTPM 73.5
Mouse sample Sample description nTPM
Midbrain
nTPM: 73.5
Samples: 4

Max nTPM: 76.3
Min nTPM: 70.3
Sample A Male 70.3
Sample B Male 72.4
Sample C Female 76.3
Sample D Female 74.9

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 0.2
1675 Antisense, RP_040604_01_C10, Mouse strain C57BL/6J (56 days, male) 0.2
1676 Antisense, RP_040604_01_C10, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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