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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		131.870
RNA expressioni
Consensus:33.3 nTPM
HPA:33.3 nTPM
GTEx:38.7 nTPM
FANTOM5:21.7 Scaled Tags Per Million
Pig:17.6 nTPM
Mouse:4.7 nTPM
Allen mouse:3.7 Expression energy

AMYGDALA - Mouse brain profilei , antibody CAB079015
Amygdala mean intensity 131.870
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 89.212
Basal medial amygdaloid nucleus 117.563
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 81.896
Cortical amygdala 120.057
Central amygdala 124.286
Medial amygdaloid nucleus 101.431

AMYGDALA - HPA Brain RNA-seq
Max nTPM 33.3
Sample id Sample description nTPM
Amygdala
nTPM: 33.3
2695 Female, age 67, right hemisphere 42.8
2814 Male, age 76, right hemisphere 33.2
1987 Female, age 91, left hemisphere 32.2
2517 Female, age 94, left hemisphere 29.8
2514 Male, age 75, right hemisphere 28.6
Basal amygdala
nTPM: 29.0
2609 Male, age 75, right hemisphere 34.1
1955 Male, age 76, both hemispheres 28.4
2110 Male, age 80, left hemisphere 28.4
2685 Female, age 94, left hemisphere 27.8
2827 Female, age 67, right hemisphere 27.8
2243 Female, age 91, right hemisphere 27.6
Central amygdala
nTPM: 31.0
2826 Female, age 94, left hemisphere 34.6
2515 Male, age 75, right hemisphere 32.5
1905 Male, age 76, both hemispheres 31.2
2701 Female, age 91, right hemisphere 28.4
2239 Male, age 80, left hemisphere 28.0
Corticomedial amygdala
nTPM: 27.3
2428 Male, age 75, right hemisphere 29.9
2535 Female, age 67, right hemisphere 27.5
2429 Female, age 94, left hemisphere 27.4
2242 Female, age 91, right hemisphere 27.3
2829 Male, age 80, left hemisphere 26.5
2240 Male, age 76, both hemispheres 25.4
Lateral amygdala
nTPM: 31.2
2516 Male, age 75, right hemisphere 34.4
2256 Male, age 80, left hemisphere 32.8
1883 Male, age 76, both hemispheres 31.4
2830 Female, age 67, right hemisphere 31.0
2255 Female, age 91, right hemisphere 29.2
2534 Female, age 94, left hemisphere 28.2
Stria terminalis, bed nucleus
nTPM: 24.7
2201 Male, age 74, unknown 26.8
1974 Female, age 91, both hemispheres 24.3
2486 Female, age 94, both hemispheres 23.0

AMYGDALA - GTEx RNA-seqi
Average nTPM 38.7
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 38.7
Samples: 152

Max nTPM: 116.0
Min nTPM: 14.8
Std nTPM: 14.3
Median nTPM: 36.5
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 116.0
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 88.3
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 76.8
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 72.6
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 71.2
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 69.9
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 68.8
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 66.5
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 64.5
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 63.2
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 61.7
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 21.7
FF:10151-102I7 76 years, female 21.7

AMYGDALA - Pig RNA-seqi
Average nTPM 17.6
Pig sample Sample description nTPM
Amygdala
nTPM: 17.6
Samples: 4

Max nTPM: 20.1
Min nTPM: 15.1
Sample A Female 18.4
Sample B Female 20.1
Sample C Male 16.7
Sample D Male 15.1

AMYGDALA - Mouse RNA-seqi
Average nTPM 4.7
Mouse sample Sample description nTPM
Amygdala
nTPM: 4.7
Samples: 4

Max nTPM: 5.3
Min nTPM: 4.2
Sample A Male 4.7
Sample B Male 4.2
Sample C Female 5.3
Sample D Female 4.5

AMYGDALA - Allen Mouse ISHi
Max Expression energy 3.7
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 3.7
356087 Antisense, RP_040617_02_C03, Mouse strain C57BL/6J (56 days, male) 4.9
71608386 Antisense, RP_050927_01_F03, Mouse strain C57BL/6J (56 days, male) 2.6

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.