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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:38.6 nTPM
HPA:38.6 nTPM
GTEx:43.8 nTPM
FANTOM5:48.4 Scaled Tags Per Million
Pig:24.2 nTPM
Mouse:15.1 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB009492
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 38.6
Sample id Sample description nTPM
Hippocampus
nTPM: 38.6
2621 Female, age 67, right hemisphere 46.1
1898 Male, age 80, left hemisphere 43.0
1855 Male, age 76, left hemisphere 40.5
1911 Female, age 85, right hemisphere 36.9
2529 Female, age 94, left hemisphere 33.2
2148 Female, age 91, left hemisphere 32.2
Dentate gyrus
nTPM: 33.9
2530 Female, age 94, left hemisphere 36.3
2010 Male, age 76, both hemispheres 35.3
2531 Female, age 67, both hemispheres 34.9
2246 Female, age 85, both hemispheres 32.7
1927 Female, age 91, both hemispheres 32.1
2528 Male, age 74, both hemispheres 31.9
Entorhinal gyrus
nTPM: 31.3
2117 Female, age 91, right hemisphere 39.6
1787 Male, age 76, left hemisphere 36.0
2764 Male, age 80, right hemisphere 29.2
1938 Female, age 85, left hemisphere 28.5
2613 Female, age 94, left hemisphere 28.3
2686 Male, age 75, right hemisphere 26.3
Hippocampus, CA1
nTPM: 30.9
2082 Female, age 91, right hemisphere 34.9
2045 Male, age 76, both hemispheres 33.4
1873 Female, age 85, both hemispheres 33.0
2527 Male, age 74, both hemispheres 29.4
2749 Male, age 80, left hemisphere 24.0
Hippocampus, CA2
nTPM: 36.4
1940 Female, age 85, left hemisphere 48.8
2437 Female, age 94, left hemisphere 36.3
2113 Female, age 91, right hemisphere 34.8
1892 Male, age 76, both hemispheres 34.1
1963 Male, age 80, left hemisphere 32.4
2249 Male, age 74, both hemispheres 32.2
Hippocampus, CA3
nTPM: 30.8
1867 Male, age 76, both hemispheres 38.0
2861 Female, age 67, both hemispheres 35.8
2436 Male, age 74, both hemispheres 31.5
1891 Female, age 85, both hemispheres 31.2
2137 Male, age 80, left hemisphere 24.8
2620 Female, age 94, left hemisphere 23.2
Parahippocampal cortex
nTPM: 30.8
2250 Female, age 67, right hemisphere 54.3
2018 Male, age 76, both hemispheres 36.1
1990 Female, age 91, right hemisphere 29.9
2245 Female, age 91, both hemispheres 29.3
2693 Female, age 94, both hemispheres 28.3
1933 Female, age 85, both hemispheres 27.4
1850 Male, age 80, both hemispheres 27.0
2532 Female, age 72, left hemisphere 25.6
2692 Male, age 74, both hemispheres 25.5
2622 Female, age 67, right hemisphere 24.8
Perirhinal gyrus
nTPM: 29.8
2521 Female, age 94, right hemisphere 33.3
1847 Female, age 91, left hemisphere 30.0
1794 Male, age 80, right hemisphere 29.6
2848 Male, age 76, right hemisphere 28.6
1841 Female, age 85, right hemisphere 27.6
Subiculum
nTPM: 33.3
2042 Male, age 76, both hemispheres 44.7
2729 Female, age 91, right hemisphere 39.4
1901 Male, age 80, both hemispheres 32.2
2619 Male, age 74, both hemispheres 32.0
1977 Female, age 85, both hemispheres 26.1
2438 Female, age 94, left hemisphere 25.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 43.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.8
Samples: 197

Max nTPM: 194.9
Min nTPM: 7.6
Std nTPM: 29.4
Median nTPM: 36.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 194.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 178.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 156.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 127.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 125.8
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 115.4
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 112.8
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 111.1
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 109.6
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 100.8
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 97.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 48.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 48.4
FF:10153-102I9 76 years, female 50.9
FF:10169-103B7 60 years, female 46.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 24.2
Samples: 4

Max nTPM: 32.3
Min nTPM: 14.2
Sample A Female 32.3
Sample B Female 21.2
Sample C Male 29.0
Sample D Male 14.2
Entorhinal cortex
nTPM: 15.3
Samples: 4

Max nTPM: 18.9
Min nTPM: 9.5
Sample A Female 16.0
Sample B Female 16.6
Sample C Male 18.9
Sample D Male 9.5
Subiculum
nTPM: 21.0
Samples: 4

Max nTPM: 25.9
Min nTPM: 17.4
Sample A Female 25.9
Sample B Female 23.0
Sample C Male 17.7
Sample D Male 17.4
Ventral hippocampus
nTPM: 22.4
Samples: 4

Max nTPM: 26.6
Min nTPM: 20.1
Sample A Female 21.4
Sample B Female 21.5
Sample C Male 26.6
Sample D Male 20.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.6
Samples: 4

Max nTPM: 16.3
Min nTPM: 12.5
Sample A Male 15.9
Sample B Male 16.3
Sample C Female 13.6
Sample D Female 12.5
Hippocampal formation
nTPM: 15.1
Samples: 4

Max nTPM: 16.3
Min nTPM: 13.5
Sample A Male 16.3
Sample B Male 13.5
Sample C Female 14.9
Sample D Female 15.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
75828191 Antisense, RP_060601_01_G03, Mouse strain C57BL/6J (56 days, male) 0.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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