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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:43.9 nTPM
HPA:43.9 nTPM
GTEx:55.9 nTPM
FANTOM5:97.7 Scaled Tags Per Million
Pig:57.2 nTPM
Mouse:124.4 nTPM
Allen mouse:3.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA056127
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 43.9
Sample id Sample description nTPM
Hippocampus
nTPM: 35.7
1898 Male, age 80, left hemisphere 41.6
1911 Female, age 85, right hemisphere 38.6
2621 Female, age 67, right hemisphere 38.1
1855 Male, age 76, left hemisphere 35.2
2148 Female, age 91, left hemisphere 30.8
2529 Female, age 94, left hemisphere 30.2
Dentate gyrus
nTPM: 42.4
2010 Male, age 76, both hemispheres 55.1
2530 Female, age 94, left hemisphere 53.9
2246 Female, age 85, both hemispheres 42.8
2528 Male, age 74, both hemispheres 38.5
1927 Female, age 91, both hemispheres 36.1
2531 Female, age 67, both hemispheres 28.0
Entorhinal gyrus
nTPM: 33.1
1938 Female, age 85, left hemisphere 40.4
2686 Male, age 75, right hemisphere 34.0
1787 Male, age 76, left hemisphere 33.4
2764 Male, age 80, right hemisphere 32.7
2613 Female, age 94, left hemisphere 30.6
2117 Female, age 91, right hemisphere 27.6
Hippocampus, CA1
nTPM: 43.9
2749 Male, age 80, left hemisphere 57.8
1873 Female, age 85, both hemispheres 52.2
2045 Male, age 76, both hemispheres 51.4
2527 Male, age 74, both hemispheres 30.0
2082 Female, age 91, right hemisphere 28.2
Hippocampus, CA2
nTPM: 37.4
2249 Male, age 74, both hemispheres 44.2
1892 Male, age 76, both hemispheres 42.9
1963 Male, age 80, left hemisphere 40.4
2437 Female, age 94, left hemisphere 37.3
1940 Female, age 85, left hemisphere 32.7
2113 Female, age 91, right hemisphere 26.9
Hippocampus, CA3
nTPM: 35.5
2137 Male, age 80, left hemisphere 42.3
1867 Male, age 76, both hemispheres 39.5
1891 Female, age 85, both hemispheres 34.5
2436 Male, age 74, both hemispheres 33.1
2861 Female, age 67, both hemispheres 33.0
2620 Female, age 94, left hemisphere 30.4
Parahippocampal cortex
nTPM: 35.3
1933 Female, age 85, both hemispheres 44.2
2622 Female, age 67, right hemisphere 40.9
2693 Female, age 94, both hemispheres 40.7
2250 Female, age 67, right hemisphere 40.0
2532 Female, age 72, left hemisphere 36.3
1850 Male, age 80, both hemispheres 34.9
2245 Female, age 91, both hemispheres 30.3
1990 Female, age 91, right hemisphere 29.4
2692 Male, age 74, both hemispheres 28.5
2018 Male, age 76, both hemispheres 28.3
Perirhinal gyrus
nTPM: 34.8
2521 Female, age 94, right hemisphere 40.3
1841 Female, age 85, right hemisphere 36.7
1794 Male, age 80, right hemisphere 32.5
2848 Male, age 76, right hemisphere 32.5
1847 Female, age 91, left hemisphere 32.1
Subiculum
nTPM: 33.5
1977 Female, age 85, both hemispheres 41.7
2042 Male, age 76, both hemispheres 40.3
1901 Male, age 80, both hemispheres 32.8
2729 Female, age 91, right hemisphere 30.2
2438 Female, age 94, left hemisphere 28.7
2619 Male, age 74, both hemispheres 27.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 55.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 55.9
Samples: 197

Max nTPM: 190.7
Min nTPM: 11.8
Std nTPM: 25.6
Median nTPM: 50.2
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 190.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 179.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 123.0
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 122.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 110.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 109.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 105.9
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 100.8
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 100.0
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 96.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 95.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 97.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 97.7
FF:10169-103B7 60 years, female 136.0
FF:10153-102I9 76 years, female 59.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 57.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 55.8
Samples: 4

Max nTPM: 70.9
Min nTPM: 39.7
Sample A Female 70.9
Sample B Female 61.1
Sample C Male 51.5
Sample D Male 39.7
Entorhinal cortex
nTPM: 45.8
Samples: 4

Max nTPM: 57.8
Min nTPM: 34.5
Sample A Female 43.5
Sample B Female 57.8
Sample C Male 47.2
Sample D Male 34.5
Subiculum
nTPM: 57.2
Samples: 4

Max nTPM: 64.5
Min nTPM: 51.3
Sample A Female 64.5
Sample B Female 60.7
Sample C Male 52.1
Sample D Male 51.3
Ventral hippocampus
nTPM: 55.5
Samples: 4

Max nTPM: 64.1
Min nTPM: 50.2
Sample A Female 64.1
Sample B Female 57.1
Sample C Male 50.2
Sample D Male 50.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 124.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 124.4
Samples: 4

Max nTPM: 131.3
Min nTPM: 116.7
Sample A Male 126.7
Sample B Male 131.3
Sample C Female 122.9
Sample D Female 116.7
Hippocampal formation
nTPM: 112.1
Samples: 4

Max nTPM: 139.5
Min nTPM: 99.6
Sample A Male 139.5
Sample B Male 101.4
Sample C Female 99.6
Sample D Female 107.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.3
70439123 Antisense, RP_050614_03_C01, Mouse strain C57BL/6J (56 days, male) 4.0
74750020 Antisense, RP_060220_05_E10, Mouse strain C57BL/6J (56 days, male) 2.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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