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THRAP3
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:24.6 nTPM
HPA:24.6 nTPM
GTEx:24.1 nTPM
FANTOM5:74.7 Scaled Tags Per Million
Pig:51.5 nTPM

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 24.6
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 22.5
1870 Female, age 42, unknown 23.3
2019 Male, age 18, unknown 23.2
1827 Male, age 72, unknown 23.0
1833 Male, age 53, unknown 23.0
2219 Male, age 76, both hemispheres 22.7
2666 Male, age 74, left hemisphere 22.6
1830 Male, age 51, unknown 22.2
2586 Male, age 75, left hemisphere 22.2
2828 Female, age 72, unknown 21.5
2411 Female, age 72, unknown 21.1
Dorsal raphe nucleus
nTPM: 22.1
2298 Female, age 72, unknown 23.7
2750 Male, age 76, both hemispheres 22.3
1828 Male, age 53, unknown 22.1
2016 Female, age 72, unknown 22.1
2047 Male, age 72, unknown 20.4
Inferior colliculus
nTPM: 22.5
2849 Male, age 72, unknown 24.0
2097 Female, age 72, unknown 22.7
1848 Female, age 42, unknown 21.8
1890 Male, age 53, unknown 21.5
Median raphe nucleus
nTPM: 24.3
2220 Male, age 76, midline 24.3
Pedunculopontine tegmental nucleus
nTPM: 23.8
2338 Male, age 61, both hemispheres 26.1
2334 Male, age 80, both hemispheres 23.9
1921 Female, age 85, both hemispheres 21.5
Periaquaductal grey, anterior
nTPM: 24.6
1947 Male, age 18, unknown 25.1
1795 Male, age 51, unknown 24.4
2502 Female, age 75, unknown 24.3
Periaquaductal grey, dorsal
nTPM: 23.1
2850 Male, age 76, both hemispheres 26.4
1831 Male, age 72, unknown 22.4
1840 Male, age 53, unknown 22.0
2464 Female, age 72, unknown 21.6
Periaquaductal grey, lateral
nTPM: 24.4
2272 Male, age 74, both hemispheres 27.0
2140 Male, age 76, both hemispheres 24.0
2053 Male, age 18, unknown 22.4
Pretectal area
nTPM: 24.1
2273 Male, age 74, both hemispheres 26.8
2667 Female, age 75, unknown 26.1
1816 Male, age 51, unknown 25.2
1815 Male, age 53, unknown 25.0
1817 Female, age 42, unknown 24.4
2224 Female, age 72, unknown 23.9
2825 Male, age 18, unknown 23.6
2407 Male, age 75, both hemispheres 23.0
2007 Male, age 72, unknown 22.6
1944 Female, age 72, unknown 22.2
2316 Male, age 76, right hemisphere 22.0
Red nucleus
nTPM: 23.6
1821 Female, age 72, unknown 25.4
2725 Female, age 75, unknown 25.3
2503 Female, age 72, unknown 25.1
1904 Male, age 53, unknown 24.3
1865 Male, age 51, unknown 24.1
1954 Female, age 42, unknown 23.9
2785 Male, age 18, unknown 23.0
2227 Male, age 72, unknown 22.6
2588 Male, age 74, left hemisphere 22.6
2823 Male, age 76, right hemisphere 22.5
2769 Male, age 72, unknown 22.4
2584 Male, age 75, left hemisphere 22.3
Substantia nigra
nTPM: 23.8
2241 Male, age 72, unknown 27.2
1916 Female, age 42, unknown 24.4
2699 Male, age 18, unknown 24.3
1851 Male, age 51, unknown 24.0
1941 Male, age 53, unknown 23.5
2590 Female, age 75, unknown 23.3
2409 Female, age 72, unknown 23.2
2583 Male, age 75, right hemisphere 23.0
2665 Male, age 74, both hemispheres 22.8
1889 Female, age 72, unknown 22.6
Superior colliculus
nTPM: 22.8
1913 Female, age 42, unknown 25.0
2261 Male, age 18, unknown 24.1
1995 Male, age 72, unknown 23.7
2587 Male, age 74, left hemisphere 23.3
1796 Male, age 53, unknown 23.1
1839 Male, age 51, unknown 23.0
2087 Female, age 72, unknown 22.3
1895 Male, age 76, right hemisphere 21.8
2664 Male, age 75, both hemispheres 21.5
2668 Female, age 75, unknown 20.2
Ventral tegmental area
nTPM: 23.2
2218 Male, age 76, both hemispheres 24.6
2223 Female, age 72, unknown 24.0
1915 Female, age 42, unknown 23.8
2021 Male, age 53, unknown 23.0
2410 Female, age 72, unknown 22.1
1942 Male, age 51, unknown 21.7

MIDBRAIN - GTEx RNA-seqi
Average nTPM 24.1
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 24.1
Samples: 139

Max nTPM: 34.0
Min nTPM: 15.6
Std nTPM: 3.4
Median nTPM: 24.1
GTEX-1LB8K-0011-R2a-SM-EZ6MQ 50-59 years, male 34.0
GTEX-1GTWX-0011-R2b-SM-ADEH5 60-69 years, male 32.4
GTEX-X4XX-0011-R2A-SM-3P623 60-69 years, male 31.2
GTEX-139TS-0011-R2b-SM-5J1MX 60-69 years, male 30.7
GTEX-OHPN-0011-R2A-SM-2I5FB 60-69 years, female 30.2
GTEX-1GN1U-0011-R2a-SM-CL53A 50-59 years, female 30.1
GTEX-1IGQW-0011-R2b-SM-D4P26 60-69 years, male 29.9
GTEX-Q2AG-0011-R2A-SM-2HMIT 40-49 years, female 29.8
GTEX-14PJO-0011-R2a-SM-5ZZVF 60-69 years, male 29.7
GTEX-YJ89-0011-R2b-SM-4RGLT 60-69 years, male 29.7
GTEX-1JMQK-0011-R2a-SM-EYYXQ 60-69 years, male 29.3
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 74.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 74.7
FF:10158-103A5 76 years, female 74.7

MIDBRAIN - Pig RNA-seqi
Average nTPM 51.5
Pig sample Sample description nTPM
Midbrain
nTPM: 51.5
Samples: 4

Max nTPM: 61.9
Min nTPM: 46.6
Sample A Female 61.9
Sample B Female 49.6
Sample C Male 47.9
Sample D Male 46.6
Periaqueductal gray
nTPM: 49.6
Samples: 3

Max nTPM: 53.3
Min nTPM: 45.3
Sample B Female 50.2
Sample C Male 53.3
Sample D Male 45.3
Substantia nigra
nTPM: 49.1
Samples: 4

Max nTPM: 51.6
Min nTPM: 47.1
Sample A Female 51.6
Sample B Female 47.1
Sample C Male 50.2
Sample D Male 47.3
Superior colliculi
nTPM: 50.2
Samples: 4

Max nTPM: 54.7
Min nTPM: 45.2
Sample A Female 54.7
Sample B Female 45.2
Sample C Male 50.0
Sample D Male 50.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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