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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Neuronal projections: Not detected
Synapses: Medium
RNA expressioni
Consensus:116.6 nTPM
HPA:116.6 nTPM
GTEx:92.3 nTPM
FANTOM5:142.1 Scaled Tags Per Million
Pig:59.9 nTPM
Mouse:232.6 nTPM
Allen mouse:20.9 Expression energy

HIPPOCAMPUS - Extended tissue profilei , antibody HPA007179
Glial cells Not detected
Neuronal cells Medium
Neuronal projections Not detected
Synapses Medium

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007179
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 116.6
Sample id Sample description nTPM
Hippocampus
nTPM: 79.5
1855 Male, age 76, left hemisphere 131.0
1898 Male, age 80, left hemisphere 99.3
2621 Female, age 67, right hemisphere 97.3
2148 Female, age 91, left hemisphere 68.2
2529 Female, age 94, left hemisphere 43.8
1911 Female, age 85, right hemisphere 37.2
Dentate gyrus
nTPM: 87.5
2530 Female, age 94, left hemisphere 130.8
1927 Female, age 91, both hemispheres 100.7
2531 Female, age 67, both hemispheres 87.8
2010 Male, age 76, both hemispheres 79.7
2246 Female, age 85, both hemispheres 72.0
2528 Male, age 74, both hemispheres 54.0
Entorhinal gyrus
nTPM: 76.1
2613 Female, age 94, left hemisphere 126.6
1787 Male, age 76, left hemisphere 78.0
2764 Male, age 80, right hemisphere 76.1
1938 Female, age 85, left hemisphere 72.6
2686 Male, age 75, right hemisphere 69.3
2117 Female, age 91, right hemisphere 34.3
Hippocampus, CA1
nTPM: 93.0
2749 Male, age 80, left hemisphere 153.4
2045 Male, age 76, both hemispheres 110.4
1873 Female, age 85, both hemispheres 77.4
2082 Female, age 91, right hemisphere 73.4
2527 Male, age 74, both hemispheres 50.7
Hippocampus, CA2
nTPM: 69.7
2437 Female, age 94, left hemisphere 106.3
1963 Male, age 80, left hemisphere 94.8
1892 Male, age 76, both hemispheres 89.4
1940 Female, age 85, left hemisphere 51.6
2113 Female, age 91, right hemisphere 50.3
2249 Male, age 74, both hemispheres 25.5
Hippocampus, CA3
nTPM: 83.0
2137 Male, age 80, left hemisphere 124.8
2861 Female, age 67, both hemispheres 117.3
2620 Female, age 94, left hemisphere 112.0
1867 Male, age 76, both hemispheres 68.3
2436 Male, age 74, both hemispheres 40.8
1891 Female, age 85, both hemispheres 34.9
Parahippocampal cortex
nTPM: 79.1
2245 Female, age 91, both hemispheres 113.2
2693 Female, age 94, both hemispheres 95.3
2250 Female, age 67, right hemisphere 85.9
1850 Male, age 80, both hemispheres 83.2
2622 Female, age 67, right hemisphere 80.8
1933 Female, age 85, both hemispheres 77.9
1990 Female, age 91, right hemisphere 72.7
2018 Male, age 76, both hemispheres 70.9
2532 Female, age 72, left hemisphere 67.0
2692 Male, age 74, both hemispheres 43.8
Perirhinal gyrus
nTPM: 116.6
1847 Female, age 91, left hemisphere 162.9
2521 Female, age 94, right hemisphere 149.9
1794 Male, age 80, right hemisphere 109.4
2848 Male, age 76, right hemisphere 81.3
1841 Female, age 85, right hemisphere 79.7
Subiculum
nTPM: 51.9
1977 Female, age 85, both hemispheres 65.5
1901 Male, age 80, both hemispheres 55.7
2438 Female, age 94, left hemisphere 55.5
2042 Male, age 76, both hemispheres 46.6
2729 Female, age 91, right hemisphere 45.0
2619 Male, age 74, both hemispheres 43.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 92.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 92.3
Samples: 197

Max nTPM: 259.9
Min nTPM: 0.6
Std nTPM: 54.9
Median nTPM: 91.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 259.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 237.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 233.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 230.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 228.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 220.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 208.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 207.7
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 204.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 202.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 188.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 142.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 142.1
FF:10169-103B7 60 years, female 208.2
FF:10153-102I9 76 years, female 76.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 59.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 47.7
Samples: 4

Max nTPM: 61.9
Min nTPM: 30.5
Sample A Female 61.9
Sample B Female 52.1
Sample C Male 46.3
Sample D Male 30.5
Entorhinal cortex
nTPM: 56.2
Samples: 4

Max nTPM: 65.0
Min nTPM: 47.2
Sample A Female 57.9
Sample B Female 47.2
Sample C Male 65.0
Sample D Male 54.8
Subiculum
nTPM: 59.9
Samples: 4

Max nTPM: 77.0
Min nTPM: 49.2
Sample A Female 77.0
Sample B Female 51.6
Sample C Male 61.6
Sample D Male 49.2
Ventral hippocampus
nTPM: 52.6
Samples: 4

Max nTPM: 72.1
Min nTPM: 35.5
Sample A Female 52.1
Sample B Female 35.5
Sample C Male 72.1
Sample D Male 50.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 232.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 232.6
Samples: 4

Max nTPM: 254.5
Min nTPM: 204.1
Sample A Male 224.5
Sample B Male 247.3
Sample C Female 204.1
Sample D Female 254.5
Hippocampal formation
nTPM: 224.1
Samples: 4

Max nTPM: 252.1
Min nTPM: 208.9
Sample A Male 208.9
Sample B Male 252.1
Sample C Female 218.2
Sample D Female 217.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 20.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.9
71381133 Antisense, RP_050510_03_F10, Mouse strain C57BL/6J (56 days, male) 20.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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