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TBC1D22A
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:10.4 nTPM
HPA:10.4 nTPM
GTEx:10.4 nTPM
FANTOM5:43.3 Scaled Tags Per Million
Pig:14.0 nTPM
Mouse:22.0 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001173
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.4
Sample id Sample description nTPM
Hippocampus
nTPM: 9.8
2148 Female, age 91, left hemisphere 10.9
2529 Female, age 94, left hemisphere 10.4
2621 Female, age 67, right hemisphere 10.1
1855 Male, age 76, left hemisphere 9.3
1898 Male, age 80, left hemisphere 9.2
1911 Female, age 85, right hemisphere 9.0
Dentate gyrus
nTPM: 10.2
2531 Female, age 67, both hemispheres 12.4
2528 Male, age 74, both hemispheres 10.0
2530 Female, age 94, left hemisphere 10.0
1927 Female, age 91, both hemispheres 9.9
2246 Female, age 85, both hemispheres 9.8
2010 Male, age 76, both hemispheres 9.2
Entorhinal gyrus
nTPM: 9.2
2764 Male, age 80, right hemisphere 10.3
2613 Female, age 94, left hemisphere 10.0
2686 Male, age 75, right hemisphere 9.1
1787 Male, age 76, left hemisphere 8.7
1938 Female, age 85, left hemisphere 8.5
2117 Female, age 91, right hemisphere 8.3
Hippocampus, CA1
nTPM: 9.8
2082 Female, age 91, right hemisphere 11.0
2045 Male, age 76, both hemispheres 10.3
1873 Female, age 85, both hemispheres 9.7
2749 Male, age 80, left hemisphere 9.1
2527 Male, age 74, both hemispheres 8.9
Hippocampus, CA2
nTPM: 9.2
1940 Female, age 85, left hemisphere 10.0
2113 Female, age 91, right hemisphere 9.9
1963 Male, age 80, left hemisphere 9.5
1892 Male, age 76, both hemispheres 8.9
2437 Female, age 94, left hemisphere 8.6
2249 Male, age 74, both hemispheres 8.5
Hippocampus, CA3
nTPM: 10.4
2620 Female, age 94, left hemisphere 13.5
2861 Female, age 67, both hemispheres 12.4
2137 Male, age 80, left hemisphere 10.1
2436 Male, age 74, both hemispheres 9.1
1867 Male, age 76, both hemispheres 9.0
1891 Female, age 85, both hemispheres 8.5
Parahippocampal cortex
nTPM: 8.8
2622 Female, age 67, right hemisphere 10.5
2245 Female, age 91, both hemispheres 9.4
2018 Male, age 76, both hemispheres 9.0
1933 Female, age 85, both hemispheres 8.9
1990 Female, age 91, right hemisphere 8.7
2692 Male, age 74, both hemispheres 8.6
2693 Female, age 94, both hemispheres 8.5
1850 Male, age 80, both hemispheres 8.3
2532 Female, age 72, left hemisphere 8.3
2250 Female, age 67, right hemisphere 7.7
Perirhinal gyrus
nTPM: 8.7
1794 Male, age 80, right hemisphere 9.5
2848 Male, age 76, right hemisphere 9.2
1847 Female, age 91, left hemisphere 8.7
1841 Female, age 85, right hemisphere 8.3
2521 Female, age 94, right hemisphere 7.9
Subiculum
nTPM: 9.2
2729 Female, age 91, right hemisphere 10.1
2619 Male, age 74, both hemispheres 9.5
2438 Female, age 94, left hemisphere 9.4
1901 Male, age 80, both hemispheres 8.9
2042 Male, age 76, both hemispheres 8.8
1977 Female, age 85, both hemispheres 8.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.4
Samples: 197

Max nTPM: 17.5
Min nTPM: 5.8
Std nTPM: 1.9
Median nTPM: 10.4
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 17.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 15.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 14.8
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 14.7
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 14.6
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 14.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 14.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 14.0
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 14.0
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 13.9
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 13.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 43.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 43.3
FF:10153-102I9 76 years, female 55.4
FF:10169-103B7 60 years, female 31.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.0
Samples: 4

Max nTPM: 18.7
Min nTPM: 8.7
Sample A Female 18.7
Sample B Female 12.7
Sample C Male 15.8
Sample D Male 8.7
Entorhinal cortex
nTPM: 10.0
Samples: 4

Max nTPM: 13.9
Min nTPM: 8.2
Sample A Female 8.3
Sample B Female 9.5
Sample C Male 13.9
Sample D Male 8.2
Subiculum
nTPM: 10.3
Samples: 4

Max nTPM: 13.5
Min nTPM: 8.9
Sample A Female 13.5
Sample B Female 8.9
Sample C Male 9.5
Sample D Male 9.2
Ventral hippocampus
nTPM: 12.8
Samples: 4

Max nTPM: 15.2
Min nTPM: 10.0
Sample A Female 12.0
Sample B Female 10.0
Sample C Male 15.2
Sample D Male 13.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 22.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.0
Samples: 4

Max nTPM: 23.2
Min nTPM: 21.1
Sample A Male 22.4
Sample B Male 23.2
Sample C Female 21.1
Sample D Female 21.3
Hippocampal formation
nTPM: 20.7
Samples: 4

Max nTPM: 21.6
Min nTPM: 19.9
Sample A Male 21.6
Sample B Male 21.0
Sample C Female 19.9
Sample D Female 20.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
68444684 Antisense, RP_050111_02_C10, Mouse strain C57BL/6J (56 days, male) 0.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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