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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:33.4 nTPM
HPA:33.4 nTPM
GTEx:20.0 nTPM
FANTOM5:67.7 Scaled Tags Per Million
Pig:31.7 nTPM
Mouse:30.8 nTPM
Allen mouse:2.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018472Antibody HPA021062
Glial cells LowLow
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.4
Sample id Sample description nTPM
Hippocampus
nTPM: 31.7
2621 Female, age 67, right hemisphere 32.7
1898 Male, age 80, left hemisphere 32.3
2529 Female, age 94, left hemisphere 32.2
2148 Female, age 91, left hemisphere 31.6
1911 Female, age 85, right hemisphere 31.0
1855 Male, age 76, left hemisphere 30.5
Dentate gyrus
nTPM: 32.7
2531 Female, age 67, both hemispheres 34.5
2010 Male, age 76, both hemispheres 34.1
2246 Female, age 85, both hemispheres 33.6
1927 Female, age 91, both hemispheres 32.4
2528 Male, age 74, both hemispheres 31.0
2530 Female, age 94, left hemisphere 30.7
Entorhinal gyrus
nTPM: 32.3
2686 Male, age 75, right hemisphere 33.3
1938 Female, age 85, left hemisphere 32.6
2764 Male, age 80, right hemisphere 32.6
1787 Male, age 76, left hemisphere 32.3
2117 Female, age 91, right hemisphere 32.2
2613 Female, age 94, left hemisphere 30.7
Hippocampus, CA1
nTPM: 33.4
2045 Male, age 76, both hemispheres 37.3
2749 Male, age 80, left hemisphere 34.0
1873 Female, age 85, both hemispheres 32.4
2527 Male, age 74, both hemispheres 32.1
2082 Female, age 91, right hemisphere 30.9
Hippocampus, CA2
nTPM: 32.2
1892 Male, age 76, both hemispheres 36.7
2113 Female, age 91, right hemisphere 31.9
1963 Male, age 80, left hemisphere 31.7
1940 Female, age 85, left hemisphere 31.2
2437 Female, age 94, left hemisphere 31.0
2249 Male, age 74, both hemispheres 30.9
Hippocampus, CA3
nTPM: 32.9
1867 Male, age 76, both hemispheres 35.6
2137 Male, age 80, left hemisphere 33.4
2861 Female, age 67, both hemispheres 33.0
2620 Female, age 94, left hemisphere 32.7
1891 Female, age 85, both hemispheres 31.6
2436 Male, age 74, both hemispheres 31.4
Parahippocampal cortex
nTPM: 32.7
2622 Female, age 67, right hemisphere 34.0
2532 Female, age 72, left hemisphere 33.9
2018 Male, age 76, both hemispheres 33.6
2245 Female, age 91, both hemispheres 33.5
2250 Female, age 67, right hemisphere 33.1
1933 Female, age 85, both hemispheres 32.5
1990 Female, age 91, right hemisphere 32.1
1850 Male, age 80, both hemispheres 31.8
2693 Female, age 94, both hemispheres 31.7
2692 Male, age 74, both hemispheres 30.9
Perirhinal gyrus
nTPM: 32.4
1841 Female, age 85, right hemisphere 33.6
2848 Male, age 76, right hemisphere 33.0
2521 Female, age 94, right hemisphere 32.3
1794 Male, age 80, right hemisphere 32.0
1847 Female, age 91, left hemisphere 31.1
Subiculum
nTPM: 33.0
2042 Male, age 76, both hemispheres 35.9
1977 Female, age 85, both hemispheres 33.4
2438 Female, age 94, left hemisphere 33.3
1901 Male, age 80, both hemispheres 33.1
2619 Male, age 74, both hemispheres 32.2
2729 Female, age 91, right hemisphere 30.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.0
Samples: 197

Max nTPM: 51.5
Min nTPM: 10.3
Std nTPM: 5.7
Median nTPM: 18.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 51.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 45.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 42.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 38.7
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 38.2
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 36.5
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 35.9
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 34.6
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 33.1
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 30.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 30.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 67.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 67.7
FF:10169-103B7 60 years, female 93.1
FF:10153-102I9 76 years, female 42.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 30.7
Samples: 4

Max nTPM: 32.8
Min nTPM: 28.3
Sample A Female 31.5
Sample B Female 30.3
Sample C Male 32.8
Sample D Male 28.3
Entorhinal cortex
nTPM: 31.7
Samples: 4

Max nTPM: 35.3
Min nTPM: 29.1
Sample A Female 30.5
Sample B Female 35.3
Sample C Male 31.8
Sample D Male 29.1
Subiculum
nTPM: 29.7
Samples: 4

Max nTPM: 34.5
Min nTPM: 27.8
Sample A Female 34.5
Sample B Female 28.4
Sample C Male 27.9
Sample D Male 27.8
Ventral hippocampus
nTPM: 27.1
Samples: 4

Max nTPM: 30.6
Min nTPM: 24.3
Sample A Female 30.6
Sample B Female 26.2
Sample C Male 24.3
Sample D Male 27.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.6
Samples: 4

Max nTPM: 30.9
Min nTPM: 26.9
Sample A Male 26.9
Sample B Male 30.9
Sample C Female 29.8
Sample D Female 26.9
Hippocampal formation
nTPM: 30.8
Samples: 4

Max nTPM: 36.2
Min nTPM: 27.7
Sample A Male 30.7
Sample B Male 36.2
Sample C Female 27.7
Sample D Female 28.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.7
73617456 Antisense, RP_051130_01_F05, Mouse strain C57BL/6J (56 days, male) 2.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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