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SZRD1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:38.5 nTPM
HPA:38.5 nTPM
GTEx:30.8 nTPM
FANTOM5:50.0 Scaled Tags Per Million
Pig:34.9 nTPM
Mouse:12.2 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024221
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 38.5
Sample id Sample description nTPM
Hippocampus
nTPM: 38.2
2529 Female, age 94, left hemisphere 38.7
1855 Male, age 76, left hemisphere 38.6
1911 Female, age 85, right hemisphere 38.6
2621 Female, age 67, right hemisphere 38.5
1898 Male, age 80, left hemisphere 38.0
2148 Female, age 91, left hemisphere 36.9
Dentate gyrus
nTPM: 37.4
2530 Female, age 94, left hemisphere 41.4
2010 Male, age 76, both hemispheres 37.8
2246 Female, age 85, both hemispheres 37.6
2528 Male, age 74, both hemispheres 37.6
2531 Female, age 67, both hemispheres 36.5
1927 Female, age 91, both hemispheres 33.6
Entorhinal gyrus
nTPM: 36.8
2117 Female, age 91, right hemisphere 42.4
2686 Male, age 75, right hemisphere 38.3
1787 Male, age 76, left hemisphere 36.3
1938 Female, age 85, left hemisphere 35.2
2764 Male, age 80, right hemisphere 34.9
2613 Female, age 94, left hemisphere 33.6
Hippocampus, CA1
nTPM: 36.9
1873 Female, age 85, both hemispheres 38.0
2749 Male, age 80, left hemisphere 37.3
2527 Male, age 74, both hemispheres 37.2
2082 Female, age 91, right hemisphere 36.9
2045 Male, age 76, both hemispheres 35.2
Hippocampus, CA2
nTPM: 36.9
1963 Male, age 80, left hemisphere 39.3
1940 Female, age 85, left hemisphere 37.2
2249 Male, age 74, both hemispheres 37.1
2437 Female, age 94, left hemisphere 36.7
2113 Female, age 91, right hemisphere 36.3
1892 Male, age 76, both hemispheres 34.6
Hippocampus, CA3
nTPM: 38.0
2861 Female, age 67, both hemispheres 42.3
1891 Female, age 85, both hemispheres 38.3
2436 Male, age 74, both hemispheres 37.5
1867 Male, age 76, both hemispheres 37.0
2137 Male, age 80, left hemisphere 36.5
2620 Female, age 94, left hemisphere 36.5
Parahippocampal cortex
nTPM: 35.8
2692 Male, age 74, both hemispheres 40.0
2622 Female, age 67, right hemisphere 38.7
2018 Male, age 76, both hemispheres 36.5
2245 Female, age 91, both hemispheres 36.2
2250 Female, age 67, right hemisphere 35.5
2532 Female, age 72, left hemisphere 35.5
1933 Female, age 85, both hemispheres 35.3
1990 Female, age 91, right hemisphere 34.4
1850 Male, age 80, both hemispheres 33.4
2693 Female, age 94, both hemispheres 32.3
Perirhinal gyrus
nTPM: 33.5
2521 Female, age 94, right hemisphere 34.1
2848 Male, age 76, right hemisphere 33.7
1841 Female, age 85, right hemisphere 33.5
1794 Male, age 80, right hemisphere 33.3
1847 Female, age 91, left hemisphere 33.0
Subiculum
nTPM: 38.5
2042 Male, age 76, both hemispheres 40.4
2619 Male, age 74, both hemispheres 39.8
2438 Female, age 94, left hemisphere 39.3
2729 Female, age 91, right hemisphere 38.5
1901 Male, age 80, both hemispheres 36.9
1977 Female, age 85, both hemispheres 36.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.8
Samples: 197

Max nTPM: 51.8
Min nTPM: 16.2
Std nTPM: 6.8
Median nTPM: 30.0
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 51.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 51.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 48.8
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 47.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 45.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 44.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 44.6
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 43.6
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 43.5
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 43.4
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 42.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 50.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 50.0
FF:10153-102I9 76 years, female 65.6
FF:10169-103B7 60 years, female 34.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 34.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 34.9
Samples: 4

Max nTPM: 44.4
Min nTPM: 26.2
Sample A Female 44.4
Sample B Female 33.7
Sample C Male 35.2
Sample D Male 26.2
Entorhinal cortex
nTPM: 29.9
Samples: 4

Max nTPM: 32.4
Min nTPM: 27.0
Sample A Female 28.3
Sample B Female 32.4
Sample C Male 31.8
Sample D Male 27.0
Subiculum
nTPM: 29.9
Samples: 4

Max nTPM: 34.7
Min nTPM: 27.4
Sample A Female 34.7
Sample B Female 28.7
Sample C Male 27.4
Sample D Male 28.9
Ventral hippocampus
nTPM: 34.7
Samples: 4

Max nTPM: 39.6
Min nTPM: 29.6
Sample A Female 34.5
Sample B Female 29.6
Sample C Male 39.6
Sample D Male 35.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.6
Samples: 4

Max nTPM: 12.3
Min nTPM: 9.4
Sample A Male 12.3
Sample B Male 10.0
Sample C Female 10.5
Sample D Female 9.4
Hippocampal formation
nTPM: 12.2
Samples: 4

Max nTPM: 13.7
Min nTPM: 10.1
Sample A Male 13.1
Sample B Male 10.1
Sample C Female 12.0
Sample D Female 13.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
75197510 Antisense, RP_060502_01_A10, Mouse strain C57BL/6J (56 days, male) 1.1

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