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HPF1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
Mouse brain, Intensity
Hippocampal formationi 		97.966
RNA expressioni
Consensus:19.2 nTPM
HPA:19.2 nTPM
GTEx:28.2 nTPM
FANTOM5:33.5 Scaled Tags Per Million
Pig:19.8 nTPM
Mouse:53.4 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043467
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA043467
Hippocampal formation mean intensity 97.966
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 95.824
Molecular layer of the dentate gyrus 97.966
Granular dentate gyrus 56.975
CA1 - oriens layer 88.004
CA1 - pyramidal layer 69.491
CA1 - radiatum layer 92.682
CA2 - oriens layer 70.660
CA2 - pyramidal layer 55.564
CA2 - radiatum layer 76.962
CA3 - oriens layer 70.870
CA3 - pyramidal layer 73.026
CA3 - radiatum layer 84.057
Stratum lucidum 80.005
Lacunosum moleculare 85.241
Subiculum 74.939

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.2
Sample id Sample description nTPM
Hippocampus
nTPM: 18.4
1898 Male, age 80, left hemisphere 20.0
1855 Male, age 76, left hemisphere 19.3
2621 Female, age 67, right hemisphere 18.5
1911 Female, age 85, right hemisphere 17.9
2529 Female, age 94, left hemisphere 17.8
2148 Female, age 91, left hemisphere 16.8
Dentate gyrus
nTPM: 17.8
1927 Female, age 91, both hemispheres 18.8
2010 Male, age 76, both hemispheres 18.8
2530 Female, age 94, left hemisphere 18.3
2246 Female, age 85, both hemispheres 17.8
2528 Male, age 74, both hemispheres 16.9
2531 Female, age 67, both hemispheres 15.9
Entorhinal gyrus
nTPM: 17.9
1938 Female, age 85, left hemisphere 19.7
2613 Female, age 94, left hemisphere 17.8
2117 Female, age 91, right hemisphere 17.6
2764 Male, age 80, right hemisphere 17.5
1787 Male, age 76, left hemisphere 17.4
2686 Male, age 75, right hemisphere 17.4
Hippocampus, CA1
nTPM: 18.9
2749 Male, age 80, left hemisphere 22.5
1873 Female, age 85, both hemispheres 19.4
2045 Male, age 76, both hemispheres 18.3
2527 Male, age 74, both hemispheres 17.8
2082 Female, age 91, right hemisphere 16.7
Hippocampus, CA2
nTPM: 18.8
1892 Male, age 76, both hemispheres 21.5
1963 Male, age 80, left hemisphere 19.2
2249 Male, age 74, both hemispheres 18.9
1940 Female, age 85, left hemisphere 18.7
2113 Female, age 91, right hemisphere 17.5
2437 Female, age 94, left hemisphere 17.0
Hippocampus, CA3
nTPM: 18.4
1867 Male, age 76, both hemispheres 19.7
2137 Male, age 80, left hemisphere 19.2
1891 Female, age 85, both hemispheres 19.1
2436 Male, age 74, both hemispheres 18.7
2620 Female, age 94, left hemisphere 17.4
2861 Female, age 67, both hemispheres 16.6
Parahippocampal cortex
nTPM: 18.2
1850 Male, age 80, both hemispheres 20.2
1990 Female, age 91, right hemisphere 18.5
2693 Female, age 94, both hemispheres 18.5
1933 Female, age 85, both hemispheres 18.3
2692 Male, age 74, both hemispheres 18.3
2245 Female, age 91, both hemispheres 18.2
2018 Male, age 76, both hemispheres 18.1
2250 Female, age 67, right hemisphere 18.1
2532 Female, age 72, left hemisphere 17.4
2622 Female, age 67, right hemisphere 16.3
Perirhinal gyrus
nTPM: 19.2
1841 Female, age 85, right hemisphere 19.9
1794 Male, age 80, right hemisphere 19.4
1847 Female, age 91, left hemisphere 19.4
2848 Male, age 76, right hemisphere 19.0
2521 Female, age 94, right hemisphere 18.5
Subiculum
nTPM: 18.6
2438 Female, age 94, left hemisphere 20.9
1901 Male, age 80, both hemispheres 20.0
1977 Female, age 85, both hemispheres 18.7
2042 Male, age 76, both hemispheres 18.3
2619 Male, age 74, both hemispheres 17.0
2729 Female, age 91, right hemisphere 16.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.2
Samples: 197

Max nTPM: 68.7
Min nTPM: 16.3
Std nTPM: 6.6
Median nTPM: 27.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 68.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 47.3
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 46.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 42.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 42.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 41.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 41.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 40.5
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 40.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 39.9
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 39.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.5
FF:10169-103B7 60 years, female 35.5
FF:10153-102I9 76 years, female 31.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 19.8
Samples: 4

Max nTPM: 24.8
Min nTPM: 15.4
Sample A Female 24.8
Sample B Female 18.2
Sample C Male 20.8
Sample D Male 15.4
Entorhinal cortex
nTPM: 15.9
Samples: 4

Max nTPM: 19.6
Min nTPM: 12.8
Sample A Female 14.8
Sample B Female 19.6
Sample C Male 16.4
Sample D Male 12.8
Subiculum
nTPM: 16.6
Samples: 4

Max nTPM: 23.6
Min nTPM: 14.2
Sample A Female 23.6
Sample B Female 14.3
Sample C Male 14.4
Sample D Male 14.2
Ventral hippocampus
nTPM: 16.7
Samples: 4

Max nTPM: 19.5
Min nTPM: 13.5
Sample A Female 19.5
Sample B Female 13.5
Sample C Male 15.7
Sample D Male 17.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 53.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 46.2
Samples: 4

Max nTPM: 51.4
Min nTPM: 42.2
Sample A Male 45.7
Sample B Male 51.4
Sample C Female 45.5
Sample D Female 42.2
Hippocampal formation
nTPM: 53.5
Samples: 4

Max nTPM: 63.4
Min nTPM: 47.0
Sample A Male 63.4
Sample B Male 50.6
Sample C Female 52.8
Sample D Female 47.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
75990648 Antisense, RP_060608_01_E07, Mouse strain C57BL/6J (56 days, male) 0.2

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