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PITHD1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:107.8 nTPM
HPA:107.8 nTPM
GTEx:110.4 nTPM
FANTOM5:122.0 Scaled Tags Per Million
Pig:77.0 nTPM
Mouse:82.8 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA016936
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 107.8
Sample id Sample description nTPM
Hippocampus
nTPM: 92.2
1898 Male, age 80, left hemisphere 107.1
1855 Male, age 76, left hemisphere 98.8
2621 Female, age 67, right hemisphere 91.8
2148 Female, age 91, left hemisphere 86.6
2529 Female, age 94, left hemisphere 84.8
1911 Female, age 85, right hemisphere 84.1
Dentate gyrus
nTPM: 94.4
2010 Male, age 76, both hemispheres 102.4
1927 Female, age 91, both hemispheres 100.2
2530 Female, age 94, left hemisphere 94.3
2528 Male, age 74, both hemispheres 92.2
2246 Female, age 85, both hemispheres 91.0
2531 Female, age 67, both hemispheres 86.0
Entorhinal gyrus
nTPM: 93.1
2764 Male, age 80, right hemisphere 104.2
1938 Female, age 85, left hemisphere 97.6
1787 Male, age 76, left hemisphere 93.5
2613 Female, age 94, left hemisphere 92.2
2686 Male, age 75, right hemisphere 85.5
2117 Female, age 91, right hemisphere 85.4
Hippocampus, CA1
nTPM: 98.4
2749 Male, age 80, left hemisphere 116.8
2045 Male, age 76, both hemispheres 101.5
1873 Female, age 85, both hemispheres 99.1
2527 Male, age 74, both hemispheres 88.0
2082 Female, age 91, right hemisphere 86.7
Hippocampus, CA2
nTPM: 94.8
1892 Male, age 76, both hemispheres 108.4
1963 Male, age 80, left hemisphere 102.2
2249 Male, age 74, both hemispheres 94.3
1940 Female, age 85, left hemisphere 90.7
2113 Female, age 91, right hemisphere 86.5
2437 Female, age 94, left hemisphere 86.4
Hippocampus, CA3
nTPM: 92.6
2137 Male, age 80, left hemisphere 102.1
1867 Male, age 76, both hemispheres 101.6
2620 Female, age 94, left hemisphere 92.6
2436 Male, age 74, both hemispheres 88.3
1891 Female, age 85, both hemispheres 88.1
2861 Female, age 67, both hemispheres 82.8
Parahippocampal cortex
nTPM: 95.3
1850 Male, age 80, both hemispheres 110.6
1933 Female, age 85, both hemispheres 100.2
2245 Female, age 91, both hemispheres 99.1
2693 Female, age 94, both hemispheres 96.6
1990 Female, age 91, right hemisphere 95.4
2532 Female, age 72, left hemisphere 94.5
2250 Female, age 67, right hemisphere 94.4
2018 Male, age 76, both hemispheres 94.2
2692 Male, age 74, both hemispheres 85.3
2622 Female, age 67, right hemisphere 83.0
Perirhinal gyrus
nTPM: 107.8
1794 Male, age 80, right hemisphere 115.9
1847 Female, age 91, left hemisphere 110.4
1841 Female, age 85, right hemisphere 105.0
2521 Female, age 94, right hemisphere 104.8
2848 Male, age 76, right hemisphere 102.9
Subiculum
nTPM: 89.3
1977 Female, age 85, both hemispheres 95.9
1901 Male, age 80, both hemispheres 92.8
2042 Male, age 76, both hemispheres 91.9
2619 Male, age 74, both hemispheres 86.0
2729 Female, age 91, right hemisphere 85.6
2438 Female, age 94, left hemisphere 83.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 110.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 110.4
Samples: 197

Max nTPM: 259.2
Min nTPM: 49.2
Std nTPM: 35.0
Median nTPM: 104.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 259.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 246.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 196.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 192.8
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 191.0
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 185.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 178.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 177.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 175.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 174.5
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 173.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 122.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 122.0
FF:10169-103B7 60 years, female 170.5
FF:10153-102I9 76 years, female 73.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 77.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 77.0
Samples: 4

Max nTPM: 97.5
Min nTPM: 59.1
Sample A Female 97.5
Sample B Female 82.2
Sample C Male 69.3
Sample D Male 59.1
Entorhinal cortex
nTPM: 70.1
Samples: 4

Max nTPM: 77.7
Min nTPM: 54.1
Sample A Female 75.1
Sample B Female 77.7
Sample C Male 73.5
Sample D Male 54.1
Subiculum
nTPM: 71.3
Samples: 4

Max nTPM: 95.0
Min nTPM: 62.0
Sample A Female 95.0
Sample B Female 65.4
Sample C Male 62.9
Sample D Male 62.0
Ventral hippocampus
nTPM: 72.1
Samples: 4

Max nTPM: 81.0
Min nTPM: 54.2
Sample A Female 81.0
Sample B Female 54.2
Sample C Male 80.8
Sample D Male 72.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 82.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 82.8
Samples: 4

Max nTPM: 86.9
Min nTPM: 79.7
Sample A Male 83.8
Sample B Male 86.9
Sample C Female 80.8
Sample D Female 79.7
Hippocampal formation
nTPM: 82.3
Samples: 4

Max nTPM: 89.4
Min nTPM: 77.0
Sample A Male 89.4
Sample B Male 80.3
Sample C Female 82.5
Sample D Female 77.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
71232582 Antisense, RP_050412_01_E11, Mouse strain C57BL/6J (56 days, male) 1.7

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The Human Protein Atlas

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