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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:12.5 nTPM
HPA:12.5 nTPM
GTEx:10.0 nTPM
FANTOM5:20.4 Scaled Tags Per Million
Pig:12.8 nTPM
Mouse:20.8 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005681
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.5
Sample id Sample description nTPM
Hippocampus
nTPM: 12.0
1898 Male, age 80, left hemisphere 13.2
1911 Female, age 85, right hemisphere 12.9
2529 Female, age 94, left hemisphere 12.5
1855 Male, age 76, left hemisphere 11.8
2621 Female, age 67, right hemisphere 10.8
2148 Female, age 91, left hemisphere 10.6
Dentate gyrus
nTPM: 11.9
2528 Male, age 74, both hemispheres 12.6
2246 Female, age 85, both hemispheres 12.5
1927 Female, age 91, both hemispheres 12.0
2010 Male, age 76, both hemispheres 11.9
2531 Female, age 67, both hemispheres 11.9
2530 Female, age 94, left hemisphere 10.3
Entorhinal gyrus
nTPM: 11.5
2117 Female, age 91, right hemisphere 13.2
1787 Male, age 76, left hemisphere 12.0
1938 Female, age 85, left hemisphere 11.9
2764 Male, age 80, right hemisphere 10.9
2613 Female, age 94, left hemisphere 10.5
2686 Male, age 75, right hemisphere 10.5
Hippocampus, CA1
nTPM: 12.1
2527 Male, age 74, both hemispheres 12.5
1873 Female, age 85, both hemispheres 12.3
2749 Male, age 80, left hemisphere 12.2
2082 Female, age 91, right hemisphere 11.9
2045 Male, age 76, both hemispheres 11.4
Hippocampus, CA2
nTPM: 11.8
2437 Female, age 94, left hemisphere 12.9
2249 Male, age 74, both hemispheres 12.6
1892 Male, age 76, both hemispheres 11.7
1940 Female, age 85, left hemisphere 11.3
1963 Male, age 80, left hemisphere 11.2
2113 Female, age 91, right hemisphere 10.9
Hippocampus, CA3
nTPM: 11.9
1891 Female, age 85, both hemispheres 12.9
2436 Male, age 74, both hemispheres 12.7
1867 Male, age 76, both hemispheres 12.4
2137 Male, age 80, left hemisphere 11.8
2620 Female, age 94, left hemisphere 11.3
2861 Female, age 67, both hemispheres 9.9
Parahippocampal cortex
nTPM: 12.3
1850 Male, age 80, both hemispheres 13.4
1933 Female, age 85, both hemispheres 13.0
1990 Female, age 91, right hemisphere 12.9
2692 Male, age 74, both hemispheres 12.7
2018 Male, age 76, both hemispheres 12.3
2693 Female, age 94, both hemispheres 12.2
2250 Female, age 67, right hemisphere 11.8
2532 Female, age 72, left hemisphere 11.7
2245 Female, age 91, both hemispheres 11.5
2622 Female, age 67, right hemisphere 11.3
Perirhinal gyrus
nTPM: 12.5
2521 Female, age 94, right hemisphere 13.5
1794 Male, age 80, right hemisphere 12.5
1841 Female, age 85, right hemisphere 12.5
2848 Male, age 76, right hemisphere 12.1
1847 Female, age 91, left hemisphere 11.7
Subiculum
nTPM: 11.7
2619 Male, age 74, both hemispheres 13.4
1977 Female, age 85, both hemispheres 11.9
2042 Male, age 76, both hemispheres 11.8
2729 Female, age 91, right hemisphere 11.7
1901 Male, age 80, both hemispheres 11.3
2438 Female, age 94, left hemisphere 10.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.0
Samples: 197

Max nTPM: 24.2
Min nTPM: 4.6
Std nTPM: 3.0
Median nTPM: 9.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 24.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 23.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 18.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 18.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 18.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 17.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 17.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 17.3
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 16.4
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 16.2
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 15.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.4
FF:10153-102I9 76 years, female 24.1
FF:10169-103B7 60 years, female 16.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.8
Samples: 4

Max nTPM: 14.9
Min nTPM: 11.2
Sample A Female 14.9
Sample B Female 11.8
Sample C Male 13.1
Sample D Male 11.2
Entorhinal cortex
nTPM: 12.0
Samples: 4

Max nTPM: 13.7
Min nTPM: 10.3
Sample A Female 11.6
Sample B Female 13.7
Sample C Male 12.3
Sample D Male 10.3
Subiculum
nTPM: 11.5
Samples: 4

Max nTPM: 13.1
Min nTPM: 10.6
Sample A Female 13.1
Sample B Female 10.6
Sample C Male 10.9
Sample D Male 11.2
Ventral hippocampus
nTPM: 11.3
Samples: 4

Max nTPM: 13.5
Min nTPM: 9.2
Sample A Female 13.5
Sample B Female 10.8
Sample C Male 9.2
Sample D Male 11.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.3
Samples: 4

Max nTPM: 21.8
Min nTPM: 18.5
Sample A Male 20.8
Sample B Male 21.8
Sample C Female 20.0
Sample D Female 18.5
Hippocampal formation
nTPM: 20.8
Samples: 4

Max nTPM: 24.5
Min nTPM: 17.3
Sample A Male 24.5
Sample B Male 19.2
Sample C Female 17.3
Sample D Female 22.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
68302380 Antisense, RP_041130_02_G02, Mouse strain C57BL/6J (56 days, male) 1.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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