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NCKAP1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:72.8 nTPM
HPA:72.8 nTPM
GTEx:55.8 nTPM
FANTOM5:161.5 Scaled Tags Per Million
Pig:160.0 nTPM
Mouse:406.2 nTPM
Allen mouse:20.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020449
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 72.8
Sample id Sample description nTPM
Hippocampus
nTPM: 55.4
1898 Male, age 80, left hemisphere 78.7
1855 Male, age 76, left hemisphere 58.7
2621 Female, age 67, right hemisphere 52.9
1911 Female, age 85, right hemisphere 50.6
2148 Female, age 91, left hemisphere 50.0
2529 Female, age 94, left hemisphere 41.6
Dentate gyrus
nTPM: 55.3
1927 Female, age 91, both hemispheres 79.3
2010 Male, age 76, both hemispheres 62.9
2246 Female, age 85, both hemispheres 52.1
2528 Male, age 74, both hemispheres 47.7
2531 Female, age 67, both hemispheres 47.3
2530 Female, age 94, left hemisphere 42.6
Entorhinal gyrus
nTPM: 42.8
1938 Female, age 85, left hemisphere 54.3
2764 Male, age 80, right hemisphere 46.5
1787 Male, age 76, left hemisphere 44.5
2613 Female, age 94, left hemisphere 40.2
2117 Female, age 91, right hemisphere 36.2
2686 Male, age 75, right hemisphere 35.0
Hippocampus, CA1
nTPM: 72.8
2749 Male, age 80, left hemisphere 132.5
1873 Female, age 85, both hemispheres 73.9
2045 Male, age 76, both hemispheres 59.2
2527 Male, age 74, both hemispheres 52.9
2082 Female, age 91, right hemisphere 45.4
Hippocampus, CA2
nTPM: 55.8
1963 Male, age 80, left hemisphere 81.1
1892 Male, age 76, both hemispheres 73.7
2249 Male, age 74, both hemispheres 50.6
1940 Female, age 85, left hemisphere 46.6
2113 Female, age 91, right hemisphere 44.0
2437 Female, age 94, left hemisphere 38.9
Hippocampus, CA3
nTPM: 62.3
2137 Male, age 80, left hemisphere 110.2
1867 Male, age 76, both hemispheres 61.3
2620 Female, age 94, left hemisphere 53.4
2436 Male, age 74, both hemispheres 52.8
1891 Female, age 85, both hemispheres 50.2
2861 Female, age 67, both hemispheres 45.8
Parahippocampal cortex
nTPM: 47.0
1850 Male, age 80, both hemispheres 64.1
1933 Female, age 85, both hemispheres 51.5
2245 Female, age 91, both hemispheres 49.5
2250 Female, age 67, right hemisphere 48.3
1990 Female, age 91, right hemisphere 48.2
2693 Female, age 94, both hemispheres 48.2
2018 Male, age 76, both hemispheres 47.7
2532 Female, age 72, left hemisphere 41.9
2692 Male, age 74, both hemispheres 35.5
2622 Female, age 67, right hemisphere 35.3
Perirhinal gyrus
nTPM: 61.1
1841 Female, age 85, right hemisphere 66.1
1847 Female, age 91, left hemisphere 65.9
1794 Male, age 80, right hemisphere 65.8
2521 Female, age 94, right hemisphere 55.9
2848 Male, age 76, right hemisphere 51.7
Subiculum
nTPM: 44.3
1901 Male, age 80, both hemispheres 62.3
1977 Female, age 85, both hemispheres 49.8
2729 Female, age 91, right hemisphere 43.3
2042 Male, age 76, both hemispheres 40.1
2619 Male, age 74, both hemispheres 35.2
2438 Female, age 94, left hemisphere 35.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 55.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 55.8
Samples: 197

Max nTPM: 126.8
Min nTPM: 21.2
Std nTPM: 22.0
Median nTPM: 52.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 126.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 124.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 117.5
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 106.8
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 105.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 105.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 104.9
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 102.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 97.5
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 97.4
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 96.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 161.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 161.5
FF:10169-103B7 60 years, female 177.8
FF:10153-102I9 76 years, female 145.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 160.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 160.1
Samples: 4

Max nTPM: 207.2
Min nTPM: 122.1
Sample A Female 207.2
Sample B Female 177.9
Sample C Male 122.1
Sample D Male 133.0
Entorhinal cortex
nTPM: 95.7
Samples: 4

Max nTPM: 114.0
Min nTPM: 76.4
Sample A Female 99.2
Sample B Female 114.0
Sample C Male 93.0
Sample D Male 76.4
Subiculum
nTPM: 88.0
Samples: 4

Max nTPM: 109.8
Min nTPM: 77.6
Sample A Female 109.8
Sample B Female 77.6
Sample C Male 84.3
Sample D Male 80.1
Ventral hippocampus
nTPM: 120.4
Samples: 4

Max nTPM: 180.0
Min nTPM: 91.4
Sample A Female 117.7
Sample B Female 92.5
Sample C Male 91.4
Sample D Male 180.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 406.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 291.2
Samples: 4

Max nTPM: 299.9
Min nTPM: 278.9
Sample A Male 287.1
Sample B Male 278.9
Sample C Female 298.9
Sample D Female 299.9
Hippocampal formation
nTPM: 406.2
Samples: 4

Max nTPM: 447.3
Min nTPM: 346.0
Sample A Male 394.2
Sample B Male 437.3
Sample C Female 447.3
Sample D Female 346.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 20.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.9
69782073 Antisense, RP_050505_02_C06, Mouse strain C57BL/6J (56 days, male) 20.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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