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TNK2
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:59.8 nTPM
HPA:59.8 nTPM
GTEx:33.9 nTPM
FANTOM5:24.1 Scaled Tags Per Million
Pig:43.1 nTPM
Mouse:67.9 nTPM
Allen mouse:0.5 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 59.8
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 56.5
2586 Male, age 75, left hemisphere 78.1
2219 Male, age 76, both hemispheres 66.2
1827 Male, age 72, unknown 57.9
2828 Female, age 72, unknown 57.4
2666 Male, age 74, left hemisphere 57.3
1833 Male, age 53, unknown 55.5
2411 Female, age 72, unknown 48.5
1870 Female, age 42, unknown 48.4
1830 Male, age 51, unknown 48.3
2019 Male, age 18, unknown 47.6
Dorsal raphe nucleus
nTPM: 49.1
2047 Male, age 72, unknown 55.5
1828 Male, age 53, unknown 53.2
2750 Male, age 76, both hemispheres 47.2
2016 Female, age 72, unknown 45.3
2298 Female, age 72, unknown 44.4
Inferior colliculus
nTPM: 50.9
2849 Male, age 72, unknown 61.5
1848 Female, age 42, unknown 52.7
1890 Male, age 53, unknown 47.5
2097 Female, age 72, unknown 41.7
Median raphe nucleus
nTPM: 45.0
2220 Male, age 76, midline 45.0
Pedunculopontine tegmental nucleus
nTPM: 50.7
2334 Male, age 80, both hemispheres 52.9
1921 Female, age 85, both hemispheres 51.8
2338 Male, age 61, both hemispheres 47.3
Periaquaductal grey, anterior
nTPM: 59.8
2502 Female, age 75, unknown 72.3
1795 Male, age 51, unknown 55.2
1947 Male, age 18, unknown 51.9
Periaquaductal grey, dorsal
nTPM: 46.8
2464 Female, age 72, unknown 54.4
1840 Male, age 53, unknown 49.2
2850 Male, age 76, both hemispheres 43.0
1831 Male, age 72, unknown 40.4
Periaquaductal grey, lateral
nTPM: 43.1
2140 Male, age 76, both hemispheres 46.3
2053 Male, age 18, unknown 43.4
2272 Male, age 74, both hemispheres 39.5
Pretectal area
nTPM: 49.6
2667 Female, age 75, unknown 56.7
1816 Male, age 51, unknown 55.6
2825 Male, age 18, unknown 55.5
2007 Male, age 72, unknown 55.2
2407 Male, age 75, both hemispheres 52.8
2316 Male, age 76, right hemisphere 51.5
1944 Female, age 72, unknown 48.7
1817 Female, age 42, unknown 48.2
1815 Male, age 53, unknown 45.2
2224 Female, age 72, unknown 45.1
2273 Male, age 74, both hemispheres 30.7
Red nucleus
nTPM: 49.9
2588 Male, age 74, left hemisphere 68.3
2584 Male, age 75, left hemisphere 64.5
2769 Male, age 72, unknown 58.5
2227 Male, age 72, unknown 52.9
2823 Male, age 76, right hemisphere 51.1
2785 Male, age 18, unknown 50.7
1904 Male, age 53, unknown 44.9
1954 Female, age 42, unknown 44.0
2503 Female, age 72, unknown 44.0
2725 Female, age 75, unknown 40.3
1865 Male, age 51, unknown 40.0
1821 Female, age 72, unknown 39.2
Substantia nigra
nTPM: 55.6
2665 Male, age 74, both hemispheres 85.4
2699 Male, age 18, unknown 66.5
1941 Male, age 53, unknown 61.8
1851 Male, age 51, unknown 55.9
2583 Male, age 75, right hemisphere 55.6
1916 Female, age 42, unknown 55.0
1889 Female, age 72, unknown 48.6
2590 Female, age 75, unknown 47.4
2241 Male, age 72, unknown 40.0
2409 Female, age 72, unknown 39.4
Superior colliculus
nTPM: 51.4
2664 Male, age 75, both hemispheres 74.4
1839 Male, age 51, unknown 55.4
2087 Female, age 72, unknown 53.6
1895 Male, age 76, right hemisphere 53.4
1796 Male, age 53, unknown 53.2
2668 Female, age 75, unknown 49.7
2587 Male, age 74, left hemisphere 48.9
2261 Male, age 18, unknown 47.1
1913 Female, age 42, unknown 41.0
1995 Male, age 72, unknown 37.7
Ventral tegmental area
nTPM: 49.2
1942 Male, age 51, unknown 58.6
1915 Female, age 42, unknown 50.1
2218 Male, age 76, both hemispheres 50.1
2410 Female, age 72, unknown 47.8
2021 Male, age 53, unknown 45.3
2223 Female, age 72, unknown 43.7

MIDBRAIN - GTEx RNA-seqi
Average nTPM 33.9
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 33.9
Samples: 139

Max nTPM: 76.5
Min nTPM: 9.2
Std nTPM: 14.7
Median nTPM: 31.4
GTEX-13SLX-0011-R2b-SM-5S2VP 50-59 years, female 76.5
GTEX-13O3Q-0011-R2b-SM-5KM3K 50-59 years, male 72.5
GTEX-13OW6-0011-R2a-SM-5L3HG 50-59 years, male 70.9
GTEX-T6MN-0011-R2A-SM-32QOW 50-59 years, male 70.0
GTEX-T5JC-0011-R2A-SM-32PLZ 20-29 years, male 65.9
GTEX-Z93S-0011-R2a-SM-4RGNG 50-59 years, male 64.9
GTEX-1HT8W-0011-R2a-SM-CMKH9 30-39 years, male 61.6
GTEX-13G51-0011-R2b-SM-5LZXS 60-69 years, male 61.3
GTEX-13N2G-0011-R2a-SM-5MR4Q 60-69 years, male 60.9
GTEX-13O3O-0011-R2b-SM-5P9H1 60-69 years, female 60.7
GTEX-145LS-0011-R2a-SM-5PNZI 60-69 years, female 59.9
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 24.1
FF:10158-103A5 76 years, female 24.1

MIDBRAIN - Pig RNA-seqi
Average nTPM 43.1
Pig sample Sample description nTPM
Midbrain
nTPM: 43.1
Samples: 4

Max nTPM: 49.3
Min nTPM: 39.3
Sample A Female 49.3
Sample B Female 41.1
Sample C Male 39.3
Sample D Male 42.8
Periaqueductal gray
nTPM: 38.1
Samples: 3

Max nTPM: 41.9
Min nTPM: 33.6
Sample B Female 38.9
Sample C Male 41.9
Sample D Male 33.6
Substantia nigra
nTPM: 42.4
Samples: 4

Max nTPM: 47.3
Min nTPM: 30.8
Sample A Female 47.0
Sample B Female 30.8
Sample C Male 47.3
Sample D Male 44.4
Superior colliculi
nTPM: 42.7
Samples: 4

Max nTPM: 50.5
Min nTPM: 27.6
Sample A Female 47.7
Sample B Female 27.6
Sample C Male 44.9
Sample D Male 50.5

MIDBRAIN - Mouse RNA-seqi
Average nTPM 67.9
Mouse sample Sample description nTPM
Midbrain
nTPM: 67.9
Samples: 4

Max nTPM: 71.3
Min nTPM: 63.5
Sample A Male 71.3
Sample B Male 63.5
Sample C Female 69.4
Sample D Female 67.3

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 0.5
74056144 Antisense, RP_051019_03_E12, Mouse strain C57BL/6J (56 days, male) 0.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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