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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:75.6 nTPM
HPA:75.6 nTPM
GTEx:43.5 nTPM
FANTOM5:35.8 Scaled Tags Per Million
Pig:47.2 nTPM
Mouse:56.0 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041954
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 75.6
Sample id Sample description nTPM
Hippocampus
nTPM: 57.5
2621 Female, age 67, right hemisphere 70.7
2529 Female, age 94, left hemisphere 65.9
2148 Female, age 91, left hemisphere 57.4
1911 Female, age 85, right hemisphere 51.5
1855 Male, age 76, left hemisphere 50.8
1898 Male, age 80, left hemisphere 48.7
Dentate gyrus
nTPM: 53.2
2531 Female, age 67, both hemispheres 71.1
2530 Female, age 94, left hemisphere 56.5
1927 Female, age 91, both hemispheres 53.4
2246 Female, age 85, both hemispheres 51.1
2528 Male, age 74, both hemispheres 46.6
2010 Male, age 76, both hemispheres 40.7
Entorhinal gyrus
nTPM: 75.6
2613 Female, age 94, left hemisphere 104.0
2686 Male, age 75, right hemisphere 93.3
2764 Male, age 80, right hemisphere 74.4
1787 Male, age 76, left hemisphere 62.2
1938 Female, age 85, left hemisphere 62.0
2117 Female, age 91, right hemisphere 57.7
Hippocampus, CA1
nTPM: 48.7
2082 Female, age 91, right hemisphere 61.2
2527 Male, age 74, both hemispheres 53.3
1873 Female, age 85, both hemispheres 47.3
2749 Male, age 80, left hemisphere 41.5
2045 Male, age 76, both hemispheres 40.0
Hippocampus, CA2
nTPM: 54.3
2437 Female, age 94, left hemisphere 66.7
2113 Female, age 91, right hemisphere 64.4
1940 Female, age 85, left hemisphere 55.1
1963 Male, age 80, left hemisphere 51.9
1892 Male, age 76, both hemispheres 50.3
2249 Male, age 74, both hemispheres 37.3
Hippocampus, CA3
nTPM: 55.8
2861 Female, age 67, both hemispheres 89.7
2620 Female, age 94, left hemisphere 62.4
1891 Female, age 85, both hemispheres 50.2
2137 Male, age 80, left hemisphere 48.9
1867 Male, age 76, both hemispheres 48.5
2436 Male, age 74, both hemispheres 35.4
Parahippocampal cortex
nTPM: 68.4
2622 Female, age 67, right hemisphere 107.8
2692 Male, age 74, both hemispheres 80.2
2693 Female, age 94, both hemispheres 70.5
1990 Female, age 91, right hemisphere 65.3
2245 Female, age 91, both hemispheres 65.0
2532 Female, age 72, left hemisphere 63.1
1933 Female, age 85, both hemispheres 59.5
1850 Male, age 80, both hemispheres 59.4
2250 Female, age 67, right hemisphere 58.7
2018 Male, age 76, both hemispheres 55.0
Perirhinal gyrus
nTPM: 60.5
1847 Female, age 91, left hemisphere 65.7
1794 Male, age 80, right hemisphere 63.7
2848 Male, age 76, right hemisphere 59.4
2521 Female, age 94, right hemisphere 57.1
1841 Female, age 85, right hemisphere 56.6
Subiculum
nTPM: 57.7
2619 Male, age 74, both hemispheres 72.1
2438 Female, age 94, left hemisphere 60.1
2042 Male, age 76, both hemispheres 56.0
2729 Female, age 91, right hemisphere 54.0
1977 Female, age 85, both hemispheres 53.6
1901 Male, age 80, both hemispheres 50.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 43.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.5
Samples: 197

Max nTPM: 107.2
Min nTPM: 8.9
Std nTPM: 17.9
Median nTPM: 39.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 107.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 97.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 92.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 91.3
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 90.0
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 86.3
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 84.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 82.9
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 80.4
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 79.4
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 78.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.8
FF:10153-102I9 76 years, female 55.9
FF:10169-103B7 60 years, female 15.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 47.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 47.2
Samples: 4

Max nTPM: 55.1
Min nTPM: 40.7
Sample A Female 55.1
Sample B Female 50.1
Sample C Male 42.8
Sample D Male 40.7
Entorhinal cortex
nTPM: 39.4
Samples: 4

Max nTPM: 43.0
Min nTPM: 35.3
Sample A Female 43.0
Sample B Female 35.3
Sample C Male 42.8
Sample D Male 36.3
Subiculum
nTPM: 35.3
Samples: 4

Max nTPM: 45.2
Min nTPM: 28.1
Sample A Female 45.2
Sample B Female 32.6
Sample C Male 35.3
Sample D Male 28.1
Ventral hippocampus
nTPM: 44.6
Samples: 4

Max nTPM: 54.3
Min nTPM: 31.4
Sample A Female 40.8
Sample B Female 31.4
Sample C Male 52.0
Sample D Male 54.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 56.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 56.0
Samples: 4

Max nTPM: 64.1
Min nTPM: 46.5
Sample A Male 63.2
Sample B Male 64.1
Sample C Female 50.1
Sample D Female 46.5
Hippocampal formation
nTPM: 47.2
Samples: 4

Max nTPM: 52.3
Min nTPM: 41.5
Sample A Male 48.6
Sample B Male 52.3
Sample C Female 41.5
Sample D Female 46.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
74056144 Antisense, RP_051019_03_E12, Mouse strain C57BL/6J (56 days, male) 0.9

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The Human Protein Atlas

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