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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:39.5 nTPM
HPA:39.5 nTPM
GTEx:42.8 nTPM
FANTOM5:51.6 Scaled Tags Per Million
Pig:15.7 nTPM
Mouse:7.8 nTPM
Allen mouse:2.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043142
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.5
Sample id Sample description nTPM
Hippocampus
nTPM: 39.1
1898 Male, age 80, left hemisphere 40.7
1855 Male, age 76, left hemisphere 40.3
2529 Female, age 94, left hemisphere 39.4
1911 Female, age 85, right hemisphere 38.6
2148 Female, age 91, left hemisphere 37.9
2621 Female, age 67, right hemisphere 37.9
Dentate gyrus
nTPM: 38.5
2530 Female, age 94, left hemisphere 40.9
2528 Male, age 74, both hemispheres 39.6
2531 Female, age 67, both hemispheres 37.8
2010 Male, age 76, both hemispheres 37.6
1927 Female, age 91, both hemispheres 37.4
2246 Female, age 85, both hemispheres 37.4
Entorhinal gyrus
nTPM: 37.9
2117 Female, age 91, right hemisphere 40.1
2764 Male, age 80, right hemisphere 38.7
1787 Male, age 76, left hemisphere 38.0
1938 Female, age 85, left hemisphere 37.4
2686 Male, age 75, right hemisphere 36.8
2613 Female, age 94, left hemisphere 36.7
Hippocampus, CA1
nTPM: 38.7
2749 Male, age 80, left hemisphere 40.8
2527 Male, age 74, both hemispheres 39.3
2045 Male, age 76, both hemispheres 38.8
2082 Female, age 91, right hemisphere 37.5
1873 Female, age 85, both hemispheres 37.2
Hippocampus, CA2
nTPM: 38.7
2249 Male, age 74, both hemispheres 42.1
1963 Male, age 80, left hemisphere 40.4
2437 Female, age 94, left hemisphere 38.8
2113 Female, age 91, right hemisphere 37.5
1892 Male, age 76, both hemispheres 37.2
1940 Female, age 85, left hemisphere 36.4
Hippocampus, CA3
nTPM: 39.5
2436 Male, age 74, both hemispheres 47.0
2620 Female, age 94, left hemisphere 39.6
2137 Male, age 80, left hemisphere 38.5
2861 Female, age 67, both hemispheres 38.4
1867 Male, age 76, both hemispheres 37.4
1891 Female, age 85, both hemispheres 36.3
Parahippocampal cortex
nTPM: 37.5
2245 Female, age 91, both hemispheres 38.4
2532 Female, age 72, left hemisphere 38.0
2692 Male, age 74, both hemispheres 37.9
2693 Female, age 94, both hemispheres 37.8
2250 Female, age 67, right hemisphere 37.7
2622 Female, age 67, right hemisphere 37.6
2018 Male, age 76, both hemispheres 37.0
1990 Female, age 91, right hemisphere 36.9
1850 Male, age 80, both hemispheres 36.8
1933 Female, age 85, both hemispheres 36.8
Perirhinal gyrus
nTPM: 38.5
1794 Male, age 80, right hemisphere 41.2
1841 Female, age 85, right hemisphere 38.6
1847 Female, age 91, left hemisphere 38.2
2521 Female, age 94, right hemisphere 38.1
2848 Male, age 76, right hemisphere 36.5
Subiculum
nTPM: 37.6
2619 Male, age 74, both hemispheres 38.6
2438 Female, age 94, left hemisphere 38.0
2729 Female, age 91, right hemisphere 37.8
1901 Male, age 80, both hemispheres 37.3
1977 Female, age 85, both hemispheres 37.0
2042 Male, age 76, both hemispheres 36.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 42.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 42.8
Samples: 197

Max nTPM: 82.3
Min nTPM: 19.1
Std nTPM: 10.9
Median nTPM: 41.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 82.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 79.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 73.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 71.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 71.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 69.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 65.8
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 65.1
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 64.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 63.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 62.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 51.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 51.6
FF:10169-103B7 60 years, female 68.0
FF:10153-102I9 76 years, female 35.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.7
Samples: 4

Max nTPM: 20.5
Min nTPM: 12.5
Sample A Female 20.5
Sample B Female 13.2
Sample C Male 16.7
Sample D Male 12.5
Entorhinal cortex
nTPM: 12.3
Samples: 4

Max nTPM: 14.5
Min nTPM: 9.7
Sample A Female 11.0
Sample B Female 14.5
Sample C Male 14.1
Sample D Male 9.7
Subiculum
nTPM: 11.6
Samples: 4

Max nTPM: 15.4
Min nTPM: 9.5
Sample A Female 15.4
Sample B Female 10.7
Sample C Male 10.6
Sample D Male 9.5
Ventral hippocampus
nTPM: 15.6
Samples: 4

Max nTPM: 20.1
Min nTPM: 12.1
Sample A Female 17.5
Sample B Female 12.5
Sample C Male 20.1
Sample D Male 12.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.4
Samples: 4

Max nTPM: 8.1
Min nTPM: 6.2
Sample A Male 7.8
Sample B Male 8.1
Sample C Female 7.3
Sample D Female 6.2
Hippocampal formation
nTPM: 7.8
Samples: 4

Max nTPM: 10.2
Min nTPM: 6.2
Sample A Male 10.2
Sample B Male 6.2
Sample C Female 7.4
Sample D Female 7.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.8
69262328 Antisense, RP_050303_02_A10, Mouse strain C57BL/6J (56 days, male) 2.8

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The Human Protein Atlas

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