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TNPO3
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:17.3 nTPM
HPA:17.3 nTPM
GTEx:11.2 nTPM
FANTOM5:38.5 Scaled Tags Per Million
Pig:15.9 nTPM
Mouse:37.3 nTPM
Allen mouse:3.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039555
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.3
Sample id Sample description nTPM
Hippocampus
nTPM: 14.9
1898 Male, age 80, left hemisphere 16.8
2529 Female, age 94, left hemisphere 15.9
1855 Male, age 76, left hemisphere 14.7
2621 Female, age 67, right hemisphere 14.6
2148 Female, age 91, left hemisphere 14.5
1911 Female, age 85, right hemisphere 13.0
Dentate gyrus
nTPM: 14.9
1927 Female, age 91, both hemispheres 15.5
2010 Male, age 76, both hemispheres 15.4
2528 Male, age 74, both hemispheres 15.2
2530 Female, age 94, left hemisphere 14.9
2246 Female, age 85, both hemispheres 14.6
2531 Female, age 67, both hemispheres 13.5
Entorhinal gyrus
nTPM: 15.4
2764 Male, age 80, right hemisphere 16.7
1938 Female, age 85, left hemisphere 16.1
1787 Male, age 76, left hemisphere 15.8
2117 Female, age 91, right hemisphere 15.4
2686 Male, age 75, right hemisphere 15.0
2613 Female, age 94, left hemisphere 13.7
Hippocampus, CA1
nTPM: 15.7
2749 Male, age 80, left hemisphere 19.4
1873 Female, age 85, both hemispheres 15.6
2045 Male, age 76, both hemispheres 15.1
2527 Male, age 74, both hemispheres 14.3
2082 Female, age 91, right hemisphere 14.2
Hippocampus, CA2
nTPM: 15.6
1892 Male, age 76, both hemispheres 17.9
1963 Male, age 80, left hemisphere 17.6
2249 Male, age 74, both hemispheres 14.9
2113 Female, age 91, right hemisphere 14.8
2437 Female, age 94, left hemisphere 14.5
1940 Female, age 85, left hemisphere 14.2
Hippocampus, CA3
nTPM: 15.3
2137 Male, age 80, left hemisphere 17.3
1867 Male, age 76, both hemispheres 15.8
2620 Female, age 94, left hemisphere 15.1
1891 Female, age 85, both hemispheres 14.7
2436 Male, age 74, both hemispheres 14.6
2861 Female, age 67, both hemispheres 14.3
Parahippocampal cortex
nTPM: 15.2
1850 Male, age 80, both hemispheres 17.8
1933 Female, age 85, both hemispheres 16.1
1990 Female, age 91, right hemisphere 15.3
2250 Female, age 67, right hemisphere 15.3
2532 Female, age 72, left hemisphere 15.2
2018 Male, age 76, both hemispheres 14.9
2692 Male, age 74, both hemispheres 14.9
2245 Female, age 91, both hemispheres 14.6
2693 Female, age 94, both hemispheres 14.3
2622 Female, age 67, right hemisphere 13.8
Perirhinal gyrus
nTPM: 17.3
1794 Male, age 80, right hemisphere 18.5
1847 Female, age 91, left hemisphere 18.3
1841 Female, age 85, right hemisphere 17.6
2848 Male, age 76, right hemisphere 16.5
2521 Female, age 94, right hemisphere 15.6
Subiculum
nTPM: 15.0
1977 Female, age 85, both hemispheres 16.2
1901 Male, age 80, both hemispheres 15.6
2619 Male, age 74, both hemispheres 15.3
2729 Female, age 91, right hemisphere 14.8
2438 Female, age 94, left hemisphere 14.1
2042 Male, age 76, both hemispheres 13.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.2
Samples: 197

Max nTPM: 18.0
Min nTPM: 6.4
Std nTPM: 1.8
Median nTPM: 10.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 18.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 17.0
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 16.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 16.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 16.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 15.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 15.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 15.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 15.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 14.9
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 14.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 38.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 38.5
FF:10169-103B7 60 years, female 38.7
FF:10153-102I9 76 years, female 38.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.9
Samples: 4

Max nTPM: 17.6
Min nTPM: 14.3
Sample A Female 17.6
Sample B Female 16.4
Sample C Male 15.4
Sample D Male 14.3
Entorhinal cortex
nTPM: 14.3
Samples: 4

Max nTPM: 15.1
Min nTPM: 13.0
Sample A Female 15.1
Sample B Female 15.1
Sample C Male 14.1
Sample D Male 13.0
Subiculum
nTPM: 14.8
Samples: 4

Max nTPM: 17.9
Min nTPM: 13.4
Sample A Female 17.9
Sample B Female 14.4
Sample C Male 13.4
Sample D Male 13.5
Ventral hippocampus
nTPM: 14.7
Samples: 4

Max nTPM: 15.6
Min nTPM: 13.1
Sample A Female 15.4
Sample B Female 13.1
Sample C Male 15.6
Sample D Male 14.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 37.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 34.4
Samples: 4

Max nTPM: 38.4
Min nTPM: 30.4
Sample A Male 33.0
Sample B Male 35.6
Sample C Female 30.4
Sample D Female 38.4
Hippocampal formation
nTPM: 37.3
Samples: 4

Max nTPM: 42.0
Min nTPM: 31.3
Sample A Male 34.7
Sample B Male 41.0
Sample C Female 42.0
Sample D Female 31.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.8
68798187 Antisense, RP_050215_01_H12, Mouse strain C57BL/6J (56 days, male) 3.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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