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BCAS1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:421.4 nTPM
HPA:421.4 nTPM
GTEx:542.1 nTPM
FANTOM5:251.7 Scaled Tags Per Million
Pig:151.1 nTPM
Mouse:130.0 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051816Antibody HPA054745Antibody CAB033558
Glial cells LowNot detectedNot detected
Neuronal cells Not detectedNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 421.4
Sample id Sample description nTPM
Hippocampus
nTPM: 379.4
2529 Female, age 94, left hemisphere 410.7
2621 Female, age 67, right hemisphere 398.9
1911 Female, age 85, right hemisphere 379.0
1898 Male, age 80, left hemisphere 372.9
2148 Female, age 91, left hemisphere 364.8
1855 Male, age 76, left hemisphere 350.1
Dentate gyrus
nTPM: 392.9
2530 Female, age 94, left hemisphere 565.1
2531 Female, age 67, both hemispheres 392.8
2010 Male, age 76, both hemispheres 374.6
2246 Female, age 85, both hemispheres 360.6
2528 Male, age 74, both hemispheres 335.6
1927 Female, age 91, both hemispheres 328.6
Entorhinal gyrus
nTPM: 406.1
2686 Male, age 75, right hemisphere 483.9
2117 Female, age 91, right hemisphere 457.2
2764 Male, age 80, right hemisphere 400.8
2613 Female, age 94, left hemisphere 395.9
1938 Female, age 85, left hemisphere 362.9
1787 Male, age 76, left hemisphere 336.1
Hippocampus, CA1
nTPM: 346.6
2082 Female, age 91, right hemisphere 364.7
2527 Male, age 74, both hemispheres 359.6
1873 Female, age 85, both hemispheres 353.6
2749 Male, age 80, left hemisphere 345.7
2045 Male, age 76, both hemispheres 309.6
Hippocampus, CA2
nTPM: 380.6
1963 Male, age 80, left hemisphere 450.8
2437 Female, age 94, left hemisphere 416.0
1940 Female, age 85, left hemisphere 369.4
2113 Female, age 91, right hemisphere 369.3
2249 Male, age 74, both hemispheres 349.8
1892 Male, age 76, both hemispheres 328.1
Hippocampus, CA3
nTPM: 347.1
1891 Female, age 85, both hemispheres 394.8
2861 Female, age 67, both hemispheres 371.0
1867 Male, age 76, both hemispheres 348.5
2620 Female, age 94, left hemisphere 324.5
2137 Male, age 80, left hemisphere 322.4
2436 Male, age 74, both hemispheres 321.5
Parahippocampal cortex
nTPM: 373.1
2532 Female, age 72, left hemisphere 430.7
2692 Male, age 74, both hemispheres 425.7
2622 Female, age 67, right hemisphere 395.7
1990 Female, age 91, right hemisphere 374.0
2245 Female, age 91, both hemispheres 369.5
1850 Male, age 80, both hemispheres 366.3
1933 Female, age 85, both hemispheres 352.6
2018 Male, age 76, both hemispheres 351.8
2693 Female, age 94, both hemispheres 337.4
2250 Female, age 67, right hemisphere 327.4
Perirhinal gyrus
nTPM: 327.2
1847 Female, age 91, left hemisphere 333.3
2848 Male, age 76, right hemisphere 332.3
1794 Male, age 80, right hemisphere 327.6
1841 Female, age 85, right hemisphere 321.7
2521 Female, age 94, right hemisphere 321.0
Subiculum
nTPM: 421.4
2438 Female, age 94, left hemisphere 489.5
2042 Male, age 76, both hemispheres 461.3
1901 Male, age 80, both hemispheres 442.8
1977 Female, age 85, both hemispheres 401.1
2619 Male, age 74, both hemispheres 370.5
2729 Female, age 91, right hemisphere 363.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 542.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 542.1
Samples: 197

Max nTPM: 2334.6
Min nTPM: 61.4
Std nTPM: 347.1
Median nTPM: 446.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 2334.6
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 1720.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 1646.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 1619.8
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 1485.3
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 1471.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1461.0
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 1347.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1293.1
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 1224.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 1200.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 251.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 251.7
FF:10153-102I9 76 years, female 260.7
FF:10169-103B7 60 years, female 242.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 151.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 151.1
Samples: 4

Max nTPM: 263.5
Min nTPM: 42.1
Sample A Female 263.5
Sample B Female 94.1
Sample C Male 204.7
Sample D Male 42.1
Entorhinal cortex
nTPM: 43.5
Samples: 4

Max nTPM: 66.3
Min nTPM: 30.2
Sample A Female 30.2
Sample B Female 66.3
Sample C Male 33.0
Sample D Male 44.4
Subiculum
nTPM: 53.5
Samples: 4

Max nTPM: 71.6
Min nTPM: 41.9
Sample A Female 71.6
Sample B Female 54.0
Sample C Male 46.3
Sample D Male 41.9
Ventral hippocampus
nTPM: 89.3
Samples: 4

Max nTPM: 118.9
Min nTPM: 45.7
Sample A Female 108.8
Sample B Female 45.7
Sample C Male 83.7
Sample D Male 118.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 130.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 70.2
Samples: 4

Max nTPM: 101.8
Min nTPM: 30.8
Sample A Male 101.8
Sample B Male 76.7
Sample C Female 71.5
Sample D Female 30.8
Hippocampal formation
nTPM: 130.1
Samples: 4

Max nTPM: 162.4
Min nTPM: 117.4
Sample A Male 120.3
Sample B Male 120.1
Sample C Female 162.4
Sample D Female 117.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
77371831 Antisense, RP_070116_02_E08, Mouse strain C57BL/6J (56 days, male) 1.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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