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SLC9A3R2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:82.4 nTPM
HPA:82.4 nTPM
GTEx:114.1 nTPM
FANTOM5:69.8 Scaled Tags Per Million
Pig:28.0 nTPM
Mouse:31.9 nTPM
Allen mouse:7.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001672Antibody HPA066520
Glial cells LowNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 82.4
Sample id Sample description nTPM
Hippocampus
nTPM: 78.8
2529 Female, age 94, left hemisphere 85.8
2621 Female, age 67, right hemisphere 81.7
1898 Male, age 80, left hemisphere 79.7
1911 Female, age 85, right hemisphere 75.9
1855 Male, age 76, left hemisphere 75.8
2148 Female, age 91, left hemisphere 73.7
Dentate gyrus
nTPM: 80.4
2530 Female, age 94, left hemisphere 107.6
2010 Male, age 76, both hemispheres 79.8
2531 Female, age 67, both hemispheres 79.1
1927 Female, age 91, both hemispheres 72.5
2528 Male, age 74, both hemispheres 72.4
2246 Female, age 85, both hemispheres 71.0
Entorhinal gyrus
nTPM: 82.4
2686 Male, age 75, right hemisphere 88.8
2613 Female, age 94, left hemisphere 85.3
2764 Male, age 80, right hemisphere 84.2
2117 Female, age 91, right hemisphere 82.0
1787 Male, age 76, left hemisphere 79.4
1938 Female, age 85, left hemisphere 74.9
Hippocampus, CA1
nTPM: 72.5
2527 Male, age 74, both hemispheres 79.3
2749 Male, age 80, left hemisphere 75.8
1873 Female, age 85, both hemispheres 71.2
2082 Female, age 91, right hemisphere 69.3
2045 Male, age 76, both hemispheres 66.9
Hippocampus, CA2
nTPM: 79.1
2437 Female, age 94, left hemisphere 92.3
1963 Male, age 80, left hemisphere 90.2
1892 Male, age 76, both hemispheres 76.0
2249 Male, age 74, both hemispheres 75.3
2113 Female, age 91, right hemisphere 71.0
1940 Female, age 85, left hemisphere 69.9
Hippocampus, CA3
nTPM: 76.2
2861 Female, age 67, both hemispheres 97.0
1867 Male, age 76, both hemispheres 75.5
1891 Female, age 85, both hemispheres 74.7
2137 Male, age 80, left hemisphere 71.8
2620 Female, age 94, left hemisphere 71.7
2436 Male, age 74, both hemispheres 66.2
Parahippocampal cortex
nTPM: 76.9
2622 Female, age 67, right hemisphere 90.1
2692 Male, age 74, both hemispheres 82.0
2532 Female, age 72, left hemisphere 79.5
2245 Female, age 91, both hemispheres 78.1
1990 Female, age 91, right hemisphere 77.4
1850 Male, age 80, both hemispheres 76.5
2018 Male, age 76, both hemispheres 74.2
1933 Female, age 85, both hemispheres 72.8
2693 Female, age 94, both hemispheres 69.8
2250 Female, age 67, right hemisphere 68.5
Perirhinal gyrus
nTPM: 73.3
1794 Male, age 80, right hemisphere 77.7
1841 Female, age 85, right hemisphere 75.1
1847 Female, age 91, left hemisphere 73.2
2848 Male, age 76, right hemisphere 72.2
2521 Female, age 94, right hemisphere 68.1
Subiculum
nTPM: 80.6
2438 Female, age 94, left hemisphere 89.0
2042 Male, age 76, both hemispheres 82.9
2619 Male, age 74, both hemispheres 81.0
1901 Male, age 80, both hemispheres 80.4
1977 Female, age 85, both hemispheres 76.3
2729 Female, age 91, right hemisphere 73.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 114.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 114.1
Samples: 197

Max nTPM: 405.4
Min nTPM: 38.3
Std nTPM: 54.4
Median nTPM: 101.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 405.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 361.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 337.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 275.0
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 264.4
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 256.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 252.6
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 251.1
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 244.2
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 223.3
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 221.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 69.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 69.8
FF:10153-102I9 76 years, female 93.7
FF:10169-103B7 60 years, female 46.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.0
Samples: 4

Max nTPM: 31.5
Min nTPM: 12.1
Sample A Female 25.5
Sample B Female 18.7
Sample C Male 31.5
Sample D Male 12.1
Entorhinal cortex
nTPM: 28.0
Samples: 4

Max nTPM: 32.2
Min nTPM: 26.0
Sample A Female 26.3
Sample B Female 32.2
Sample C Male 27.4
Sample D Male 26.0
Subiculum
nTPM: 21.2
Samples: 4

Max nTPM: 29.7
Min nTPM: 15.3
Sample A Female 29.7
Sample B Female 15.3
Sample C Male 19.9
Sample D Male 19.8
Ventral hippocampus
nTPM: 21.1
Samples: 4

Max nTPM: 30.8
Min nTPM: 13.8
Sample A Female 19.4
Sample B Female 13.8
Sample C Male 30.8
Sample D Male 20.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.7
Samples: 4

Max nTPM: 32.4
Min nTPM: 30.7
Sample A Male 32.4
Sample B Male 31.3
Sample C Female 32.3
Sample D Female 30.7
Hippocampal formation
nTPM: 31.9
Samples: 4

Max nTPM: 38.4
Min nTPM: 26.3
Sample A Male 26.3
Sample B Male 27.7
Sample C Female 35.1
Sample D Female 38.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.6
74657980 Antisense, RP_051121_03_D11, Mouse strain C57BL/6J (56 days, male) 7.6
73573187 Antisense, RP_051121_03_D11, Mouse strain C57BL/6J (56 days, male) 3.8

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.