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FAM107B
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:84.2 nTPM
HPA:84.2 nTPM
GTEx:88.1 nTPM
FANTOM5:141.8 Scaled Tags Per Million
Mouse:14.0 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA073195
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 84.2
Sample id Sample description nTPM
Hippocampus
nTPM: 69.2
1911 Female, age 85, right hemisphere 78.9
2621 Female, age 67, right hemisphere 71.4
2148 Female, age 91, left hemisphere 70.8
2529 Female, age 94, left hemisphere 69.9
1898 Male, age 80, left hemisphere 62.0
1855 Male, age 76, left hemisphere 61.9
Dentate gyrus
nTPM: 72.5
2530 Female, age 94, left hemisphere 84.1
2531 Female, age 67, both hemispheres 80.5
2010 Male, age 76, both hemispheres 73.1
2528 Male, age 74, both hemispheres 69.6
2246 Female, age 85, both hemispheres 67.8
1927 Female, age 91, both hemispheres 59.6
Entorhinal gyrus
nTPM: 68.8
2117 Female, age 91, right hemisphere 93.4
2764 Male, age 80, right hemisphere 75.9
2686 Male, age 75, right hemisphere 65.7
1938 Female, age 85, left hemisphere 61.9
2613 Female, age 94, left hemisphere 60.6
1787 Male, age 76, left hemisphere 55.2
Hippocampus, CA1
nTPM: 65.1
2045 Male, age 76, both hemispheres 71.3
1873 Female, age 85, both hemispheres 70.0
2082 Female, age 91, right hemisphere 67.2
2527 Male, age 74, both hemispheres 64.8
2749 Male, age 80, left hemisphere 52.0
Hippocampus, CA2
nTPM: 69.8
1963 Male, age 80, left hemisphere 88.1
2249 Male, age 74, both hemispheres 74.9
2113 Female, age 91, right hemisphere 68.9
1940 Female, age 85, left hemisphere 66.9
2437 Female, age 94, left hemisphere 66.6
1892 Male, age 76, both hemispheres 53.4
Hippocampus, CA3
nTPM: 65.9
1891 Female, age 85, both hemispheres 97.2
1867 Male, age 76, both hemispheres 69.0
2436 Male, age 74, both hemispheres 67.3
2861 Female, age 67, both hemispheres 56.2
2620 Female, age 94, left hemisphere 55.8
2137 Male, age 80, left hemisphere 50.2
Parahippocampal cortex
nTPM: 60.8
2692 Male, age 74, both hemispheres 76.9
2532 Female, age 72, left hemisphere 71.7
1990 Female, age 91, right hemisphere 71.5
2018 Male, age 76, both hemispheres 66.0
1850 Male, age 80, both hemispheres 61.0
2245 Female, age 91, both hemispheres 59.9
1933 Female, age 85, both hemispheres 59.7
2693 Female, age 94, both hemispheres 49.5
2250 Female, age 67, right hemisphere 46.1
2622 Female, age 67, right hemisphere 45.4
Perirhinal gyrus
nTPM: 48.4
2521 Female, age 94, right hemisphere 52.6
2848 Male, age 76, right hemisphere 50.7
1794 Male, age 80, right hemisphere 48.2
1847 Female, age 91, left hemisphere 46.4
1841 Female, age 85, right hemisphere 44.1
Subiculum
nTPM: 84.2
2042 Male, age 76, both hemispheres 107.8
1901 Male, age 80, both hemispheres 97.9
1977 Female, age 85, both hemispheres 83.6
2438 Female, age 94, left hemisphere 76.7
2619 Male, age 74, both hemispheres 70.7
2729 Female, age 91, right hemisphere 68.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 88.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 88.1
Samples: 197

Max nTPM: 354.4
Min nTPM: 12.5
Std nTPM: 54.7
Median nTPM: 73.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 354.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 325.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 274.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 241.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 238.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 234.5
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 203.9
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 191.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 188.1
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 187.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 186.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 141.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 141.8
FF:10153-102I9 76 years, female 148.7
FF:10169-103B7 60 years, female 134.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.2
Samples: 4

Max nTPM: 11.6
Min nTPM: 7.3
Sample A Male 9.7
Sample B Male 8.3
Sample C Female 11.6
Sample D Female 7.3
Hippocampal formation
nTPM: 13.9
Samples: 4

Max nTPM: 15.6
Min nTPM: 12.4
Sample A Male 12.4
Sample B Male 14.0
Sample C Female 13.7
Sample D Female 15.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
68445107 Antisense, RP_050111_02_G09, Mouse strain C57BL/6J (56 days, male) 0.4
71015800 Antisense, RP_050725_02_G11, Mouse strain C57BL/6J (56 days, male) 0.0

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.