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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:140.6 nTPM
HPA:140.6 nTPM
GTEx:190.3 nTPM
FANTOM5:23.1 Scaled Tags Per Million
Pig:115.9 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040304Antibody HPA057159Antibody CAB005875
Glial cells LowLowLow
Neuronal cells MediumLowNot detected






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 140.6
Sample id Sample description nTPM
Hippocampus
nTPM: 140.6
2621 Female, age 67, right hemisphere 144.2
2529 Female, age 94, left hemisphere 142.6
1911 Female, age 85, right hemisphere 140.9
1855 Male, age 76, left hemisphere 139.3
1898 Male, age 80, left hemisphere 138.6
2148 Female, age 91, left hemisphere 138.0
Dentate gyrus
nTPM: 131.5
2530 Female, age 94, left hemisphere 144.6
2010 Male, age 76, both hemispheres 140.1
2531 Female, age 67, both hemispheres 130.3
2246 Female, age 85, both hemispheres 128.8
1927 Female, age 91, both hemispheres 123.8
2528 Male, age 74, both hemispheres 121.5
Entorhinal gyrus
nTPM: 128.6
2117 Female, age 91, right hemisphere 147.3
2686 Male, age 75, right hemisphere 132.8
1787 Male, age 76, left hemisphere 129.9
1938 Female, age 85, left hemisphere 124.5
2764 Male, age 80, right hemisphere 119.7
2613 Female, age 94, left hemisphere 117.6
Hippocampus, CA1
nTPM: 128.5
2527 Male, age 74, both hemispheres 138.0
1873 Female, age 85, both hemispheres 134.2
2045 Male, age 76, both hemispheres 129.1
2749 Male, age 80, left hemisphere 124.0
2082 Female, age 91, right hemisphere 117.3
Hippocampus, CA2
nTPM: 132.0
1940 Female, age 85, left hemisphere 138.4
2249 Male, age 74, both hemispheres 135.1
2437 Female, age 94, left hemisphere 133.1
1963 Male, age 80, left hemisphere 131.8
1892 Male, age 76, both hemispheres 128.6
2113 Female, age 91, right hemisphere 125.0
Hippocampus, CA3
nTPM: 130.3
2861 Female, age 67, both hemispheres 138.2
1891 Female, age 85, both hemispheres 137.5
1867 Male, age 76, both hemispheres 137.2
2436 Male, age 74, both hemispheres 127.1
2620 Female, age 94, left hemisphere 123.4
2137 Male, age 80, left hemisphere 118.1
Parahippocampal cortex
nTPM: 126.5
2018 Male, age 76, both hemispheres 136.2
2245 Female, age 91, both hemispheres 134.0
2250 Female, age 67, right hemisphere 131.8
2692 Male, age 74, both hemispheres 129.9
2532 Female, age 72, left hemisphere 129.7
1990 Female, age 91, right hemisphere 124.8
2622 Female, age 67, right hemisphere 122.4
1933 Female, age 85, both hemispheres 121.6
1850 Male, age 80, both hemispheres 119.5
2693 Female, age 94, both hemispheres 114.9
Perirhinal gyrus
nTPM: 118.3
2521 Female, age 94, right hemisphere 122.9
2848 Male, age 76, right hemisphere 120.6
1841 Female, age 85, right hemisphere 117.6
1847 Female, age 91, left hemisphere 116.1
1794 Male, age 80, right hemisphere 114.3
Subiculum
nTPM: 135.8
2042 Male, age 76, both hemispheres 155.2
1901 Male, age 80, both hemispheres 137.0
2438 Female, age 94, left hemisphere 134.0
2619 Male, age 74, both hemispheres 132.0
2729 Female, age 91, right hemisphere 129.4
1977 Female, age 85, both hemispheres 127.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 190.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 190.3
Samples: 197

Max nTPM: 406.9
Min nTPM: 93.1
Std nTPM: 55.6
Median nTPM: 180.8
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 406.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 345.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 339.4
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 337.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 336.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 334.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 326.8
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 325.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 323.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 321.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 315.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 23.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.1
FF:10169-103B7 60 years, female 24.0
FF:10153-102I9 76 years, female 22.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 115.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 115.9
Samples: 4

Max nTPM: 141.7
Min nTPM: 93.6
Sample A Female 141.7
Sample B Female 95.3
Sample C Male 132.9
Sample D Male 93.6
Entorhinal cortex
nTPM: 87.8
Samples: 4

Max nTPM: 102.3
Min nTPM: 72.5
Sample A Female 87.3
Sample B Female 102.3
Sample C Male 88.9
Sample D Male 72.5
Subiculum
nTPM: 93.3
Samples: 4

Max nTPM: 113.8
Min nTPM: 77.1
Sample A Female 113.8
Sample B Female 86.3
Sample C Male 77.1
Sample D Male 96.0
Ventral hippocampus
nTPM: 97.5
Samples: 4

Max nTPM: 109.4
Min nTPM: 81.3
Sample A Female 93.2
Sample B Female 81.3
Sample C Male 109.4
Sample D Male 105.9

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.