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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:220.8 nTPM
HPA:220.8 nTPM
GTEx:202.1 nTPM
FANTOM5:287.4 Scaled Tags Per Million
Pig:59.8 nTPM
Mouse:166.7 nTPM
Allen mouse:3.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB005052
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 220.8
Sample id Sample description nTPM
Hippocampus
nTPM: 220.8
1855 Male, age 76, left hemisphere 231.8
1898 Male, age 80, left hemisphere 228.1
2529 Female, age 94, left hemisphere 222.2
1911 Female, age 85, right hemisphere 218.9
2621 Female, age 67, right hemisphere 215.4
2148 Female, age 91, left hemisphere 208.3
Dentate gyrus
nTPM: 212.4
2010 Male, age 76, both hemispheres 227.8
2530 Female, age 94, left hemisphere 227.0
2528 Male, age 74, both hemispheres 213.2
2246 Female, age 85, both hemispheres 211.7
1927 Female, age 91, both hemispheres 201.9
2531 Female, age 67, both hemispheres 192.7
Entorhinal gyrus
nTPM: 209.7
2117 Female, age 91, right hemisphere 233.2
1787 Male, age 76, left hemisphere 218.6
1938 Female, age 85, left hemisphere 216.4
2764 Male, age 80, right hemisphere 205.0
2686 Male, age 75, right hemisphere 199.6
2613 Female, age 94, left hemisphere 185.4
Hippocampus, CA1
nTPM: 214.5
2045 Male, age 76, both hemispheres 218.6
1873 Female, age 85, both hemispheres 218.3
2527 Male, age 74, both hemispheres 216.8
2749 Male, age 80, left hemisphere 209.7
2082 Female, age 91, right hemisphere 209.1
Hippocampus, CA2
nTPM: 215.5
2249 Male, age 74, both hemispheres 224.4
1940 Female, age 85, left hemisphere 219.5
1963 Male, age 80, left hemisphere 214.1
2437 Female, age 94, left hemisphere 212.9
1892 Male, age 76, both hemispheres 212.4
2113 Female, age 91, right hemisphere 209.6
Hippocampus, CA3
nTPM: 206.3
1891 Female, age 85, both hemispheres 221.8
1867 Male, age 76, both hemispheres 218.3
2436 Male, age 74, both hemispheres 215.7
2137 Male, age 80, left hemisphere 201.4
2861 Female, age 67, both hemispheres 193.5
2620 Female, age 94, left hemisphere 187.1
Parahippocampal cortex
nTPM: 210.8
2018 Male, age 76, both hemispheres 229.7
1933 Female, age 85, both hemispheres 215.5
1850 Male, age 80, both hemispheres 215.3
2692 Male, age 74, both hemispheres 214.3
2250 Female, age 67, right hemisphere 213.8
1990 Female, age 91, right hemisphere 207.8
2532 Female, age 72, left hemisphere 207.2
2245 Female, age 91, both hemispheres 206.5
2693 Female, age 94, both hemispheres 200.5
2622 Female, age 67, right hemisphere 197.8
Perirhinal gyrus
nTPM: 211.5
1841 Female, age 85, right hemisphere 217.5
2848 Male, age 76, right hemisphere 210.6
1794 Male, age 80, right hemisphere 210.4
2521 Female, age 94, right hemisphere 209.8
1847 Female, age 91, left hemisphere 209.3
Subiculum
nTPM: 219.8
2042 Male, age 76, both hemispheres 235.2
2729 Female, age 91, right hemisphere 221.4
2438 Female, age 94, left hemisphere 221.3
1901 Male, age 80, both hemispheres 214.2
2619 Male, age 74, both hemispheres 214.0
1977 Female, age 85, both hemispheres 213.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 202.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 202.1
Samples: 197

Max nTPM: 360.7
Min nTPM: 124.0
Std nTPM: 44.2
Median nTPM: 193.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 360.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 340.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 320.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 319.5
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 316.5
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 307.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 284.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 279.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 279.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 277.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 277.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 287.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 287.4
FF:10153-102I9 76 years, female 370.9
FF:10169-103B7 60 years, female 204.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 59.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 59.8
Samples: 4

Max nTPM: 80.5
Min nTPM: 40.0
Sample A Female 80.5
Sample B Female 53.8
Sample C Male 64.8
Sample D Male 40.0
Entorhinal cortex
nTPM: 44.4
Samples: 4

Max nTPM: 48.6
Min nTPM: 35.7
Sample A Female 48.0
Sample B Female 48.6
Sample C Male 45.3
Sample D Male 35.7
Subiculum
nTPM: 50.9
Samples: 4

Max nTPM: 62.6
Min nTPM: 45.0
Sample A Female 62.6
Sample B Female 47.8
Sample C Male 45.0
Sample D Male 48.3
Ventral hippocampus
nTPM: 53.2
Samples: 4

Max nTPM: 61.7
Min nTPM: 40.6
Sample A Female 55.9
Sample B Female 40.6
Sample C Male 61.7
Sample D Male 54.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 166.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 158.0
Samples: 4

Max nTPM: 163.6
Min nTPM: 152.9
Sample A Male 157.5
Sample B Male 152.9
Sample C Female 163.6
Sample D Female 158.0
Hippocampal formation
nTPM: 166.7
Samples: 4

Max nTPM: 179.1
Min nTPM: 159.9
Sample A Male 179.1
Sample B Male 159.9
Sample C Female 162.4
Sample D Female 165.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.5
73606534 Antisense, RP_051130_01_B05, Mouse strain C57BL/6J (56 days, male) 3.5

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