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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:13.6 nTPM
HPA:13.6 nTPM
GTEx:10.0 nTPM
FANTOM5:70.7 Scaled Tags Per Million
Pig:31.9 nTPM
Mouse:21.2 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA061392
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.6
Sample id Sample description nTPM
Hippocampus
nTPM: 10.9
1855 Male, age 76, left hemisphere 15.3
2148 Female, age 91, left hemisphere 14.1
2621 Female, age 67, right hemisphere 12.7
2529 Female, age 94, left hemisphere 9.4
1911 Female, age 85, right hemisphere 6.9
1898 Male, age 80, left hemisphere 6.7
Dentate gyrus
nTPM: 8.7
2531 Female, age 67, both hemispheres 18.9
2246 Female, age 85, both hemispheres 11.8
2010 Male, age 76, both hemispheres 5.7
1927 Female, age 91, both hemispheres 5.6
2530 Female, age 94, left hemisphere 5.6
2528 Male, age 74, both hemispheres 4.5
Entorhinal gyrus
nTPM: 10.6
2613 Female, age 94, left hemisphere 21.6
2686 Male, age 75, right hemisphere 12.8
1938 Female, age 85, left hemisphere 12.3
1787 Male, age 76, left hemisphere 8.4
2764 Male, age 80, right hemisphere 8.0
2117 Female, age 91, right hemisphere 0.8
Hippocampus, CA1
nTPM: 10.6
2045 Male, age 76, both hemispheres 16.0
2749 Male, age 80, left hemisphere 13.0
1873 Female, age 85, both hemispheres 11.7
2527 Male, age 74, both hemispheres 8.3
2082 Female, age 91, right hemisphere 4.2
Hippocampus, CA2
nTPM: 4.5
1892 Male, age 76, both hemispheres 10.5
1963 Male, age 80, left hemisphere 5.7
2437 Female, age 94, left hemisphere 5.4
2113 Female, age 91, right hemisphere 5.0
1940 Female, age 85, left hemisphere 0.4
2249 Male, age 74, both hemispheres 0.0
Hippocampus, CA3
nTPM: 8.5
2620 Female, age 94, left hemisphere 17.7
2861 Female, age 67, both hemispheres 17.0
2137 Male, age 80, left hemisphere 8.2
1891 Female, age 85, both hemispheres 5.5
1867 Male, age 76, both hemispheres 2.5
2436 Male, age 74, both hemispheres 0.0
Parahippocampal cortex
nTPM: 11.1
2622 Female, age 67, right hemisphere 21.5
2245 Female, age 91, both hemispheres 13.7
2532 Female, age 72, left hemisphere 13.6
1933 Female, age 85, both hemispheres 11.0
2693 Female, age 94, both hemispheres 10.4
1850 Male, age 80, both hemispheres 10.3
2250 Female, age 67, right hemisphere 9.5
2018 Male, age 76, both hemispheres 7.9
2692 Male, age 74, both hemispheres 7.9
1990 Female, age 91, right hemisphere 4.9
Perirhinal gyrus
nTPM: 13.6
2848 Male, age 76, right hemisphere 19.5
1841 Female, age 85, right hemisphere 15.9
1847 Female, age 91, left hemisphere 12.9
1794 Male, age 80, right hemisphere 10.8
2521 Female, age 94, right hemisphere 9.0
Subiculum
nTPM: 5.7
2438 Female, age 94, left hemisphere 14.1
1977 Female, age 85, both hemispheres 7.8
2729 Female, age 91, right hemisphere 6.5
2619 Male, age 74, both hemispheres 5.2
1901 Male, age 80, both hemispheres 0.6
2042 Male, age 76, both hemispheres 0.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.0
Samples: 197

Max nTPM: 17.4
Min nTPM: 3.3
Std nTPM: 2.5
Median nTPM: 10.0
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 17.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 16.0
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 15.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 15.0
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 14.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 14.5
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 14.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 14.3
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 14.3
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 14.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 14.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 70.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 70.7
FF:10153-102I9 76 years, female 73.5
FF:10169-103B7 60 years, female 68.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.9
Samples: 4

Max nTPM: 22.0
Min nTPM: 16.2
Sample A Female 19.1
Sample B Female 22.0
Sample C Male 18.2
Sample D Male 16.2
Entorhinal cortex
nTPM: 31.9
Samples: 4

Max nTPM: 34.2
Min nTPM: 29.1
Sample A Female 30.8
Sample B Female 29.1
Sample C Male 33.4
Sample D Male 34.2
Subiculum
nTPM: 24.4
Samples: 4

Max nTPM: 32.1
Min nTPM: 19.3
Sample A Female 32.1
Sample B Female 23.3
Sample C Male 23.0
Sample D Male 19.3
Ventral hippocampus
nTPM: 21.0
Samples: 4

Max nTPM: 22.9
Min nTPM: 19.4
Sample A Female 19.4
Sample B Female 20.0
Sample C Male 22.9
Sample D Male 21.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.3
Samples: 4

Max nTPM: 25.6
Min nTPM: 16.8
Sample A Male 20.7
Sample B Male 21.9
Sample C Female 16.8
Sample D Female 25.6
Hippocampal formation
nTPM: 13.5
Samples: 4

Max nTPM: 15.5
Min nTPM: 12.7
Sample A Male 12.7
Sample B Male 13.0
Sample C Female 15.5
Sample D Female 12.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.