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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:44.8 nTPM
HPA:44.8 nTPM
GTEx:49.8 nTPM
FANTOM5:47.1 Scaled Tags Per Million
Pig:47.7 nTPM
Mouse:30.4 nTPM
Allen mouse:7.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017375
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 44.8
Sample id Sample description nTPM
Hippocampus
nTPM: 42.2
2621 Female, age 67, right hemisphere 48.1
1898 Male, age 80, left hemisphere 44.1
2148 Female, age 91, left hemisphere 43.7
2529 Female, age 94, left hemisphere 41.2
1855 Male, age 76, left hemisphere 40.4
1911 Female, age 85, right hemisphere 35.7
Dentate gyrus
nTPM: 43.5
2530 Female, age 94, left hemisphere 48.5
2531 Female, age 67, both hemispheres 45.4
1927 Female, age 91, both hemispheres 45.2
2528 Male, age 74, both hemispheres 41.3
2010 Male, age 76, both hemispheres 40.8
2246 Female, age 85, both hemispheres 40.0
Entorhinal gyrus
nTPM: 43.4
2613 Female, age 94, left hemisphere 51.7
2764 Male, age 80, right hemisphere 47.0
1938 Female, age 85, left hemisphere 42.9
1787 Male, age 76, left hemisphere 42.8
2686 Male, age 75, right hemisphere 38.4
2117 Female, age 91, right hemisphere 37.6
Hippocampus, CA1
nTPM: 43.2
2749 Male, age 80, left hemisphere 53.1
2045 Male, age 76, both hemispheres 42.3
1873 Female, age 85, both hemispheres 41.8
2527 Male, age 74, both hemispheres 41.7
2082 Female, age 91, right hemisphere 37.1
Hippocampus, CA2
nTPM: 41.8
1963 Male, age 80, left hemisphere 49.8
1892 Male, age 76, both hemispheres 43.9
2437 Female, age 94, left hemisphere 42.3
2249 Male, age 74, both hemispheres 39.7
1940 Female, age 85, left hemisphere 37.7
2113 Female, age 91, right hemisphere 37.5
Hippocampus, CA3
nTPM: 43.6
2620 Female, age 94, left hemisphere 50.3
2861 Female, age 67, both hemispheres 47.8
2137 Male, age 80, left hemisphere 47.6
1867 Male, age 76, both hemispheres 41.5
2436 Male, age 74, both hemispheres 37.9
1891 Female, age 85, both hemispheres 36.7
Parahippocampal cortex
nTPM: 42.0
2245 Female, age 91, both hemispheres 47.7
2532 Female, age 72, left hemisphere 46.9
1850 Male, age 80, both hemispheres 43.0
2622 Female, age 67, right hemisphere 42.1
2693 Female, age 94, both hemispheres 41.8
2250 Female, age 67, right hemisphere 41.5
1990 Female, age 91, right hemisphere 41.4
2692 Male, age 74, both hemispheres 40.9
1933 Female, age 85, both hemispheres 39.8
2018 Male, age 76, both hemispheres 34.7
Perirhinal gyrus
nTPM: 44.8
1794 Male, age 80, right hemisphere 47.5
1847 Female, age 91, left hemisphere 46.2
2521 Female, age 94, right hemisphere 46.1
2848 Male, age 76, right hemisphere 42.4
1841 Female, age 85, right hemisphere 41.9
Subiculum
nTPM: 39.8
2619 Male, age 74, both hemispheres 43.8
2438 Female, age 94, left hemisphere 41.7
1977 Female, age 85, both hemispheres 40.2
1901 Male, age 80, both hemispheres 39.7
2729 Female, age 91, right hemisphere 37.7
2042 Male, age 76, both hemispheres 35.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 49.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 49.8
Samples: 197

Max nTPM: 85.3
Min nTPM: 26.6
Std nTPM: 10.8
Median nTPM: 48.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 85.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 78.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 75.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 75.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 74.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 73.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 72.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 71.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 70.9
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 69.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 68.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 47.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.1
FF:10153-102I9 76 years, female 47.1
FF:10169-103B7 60 years, female 47.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 47.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 44.1
Samples: 4

Max nTPM: 51.7
Min nTPM: 37.1
Sample A Female 51.7
Sample B Female 45.1
Sample C Male 42.6
Sample D Male 37.1
Entorhinal cortex
nTPM: 47.7
Samples: 4

Max nTPM: 52.6
Min nTPM: 43.4
Sample A Female 52.6
Sample B Female 43.4
Sample C Male 50.1
Sample D Male 44.7
Subiculum
nTPM: 46.2
Samples: 4

Max nTPM: 58.4
Min nTPM: 39.3
Sample A Female 58.4
Sample B Female 41.8
Sample C Male 45.3
Sample D Male 39.3
Ventral hippocampus
nTPM: 46.9
Samples: 4

Max nTPM: 58.2
Min nTPM: 36.3
Sample A Female 44.2
Sample B Female 36.3
Sample C Male 58.2
Sample D Male 48.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.1
Samples: 4

Max nTPM: 30.4
Min nTPM: 29.9
Sample A Male 30.4
Sample B Male 30.0
Sample C Female 30.2
Sample D Female 29.9
Hippocampal formation
nTPM: 30.4
Samples: 4

Max nTPM: 32.8
Min nTPM: 29.0
Sample A Male 29.9
Sample B Male 29.8
Sample C Female 32.8
Sample D Female 29.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.0
583864 Antisense, RP_040831_01_C03, Mouse strain C57BL/6J (56 days, male) 7.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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