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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:15.4 nTPM
HPA:15.4 nTPM
GTEx:15.0 nTPM
FANTOM5:21.6 Scaled Tags Per Million
Pig:55.3 nTPM
Mouse:73.8 nTPM
Allen mouse:6.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA058061
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.4
Sample id Sample description nTPM
Hippocampus
nTPM: 5.5
1898 Male, age 80, left hemisphere 9.7
2621 Female, age 67, right hemisphere 8.8
2148 Female, age 91, left hemisphere 5.7
1855 Male, age 76, left hemisphere 4.7
1911 Female, age 85, right hemisphere 2.6
2529 Female, age 94, left hemisphere 1.6
Dentate gyrus
nTPM: 9.4
1927 Female, age 91, both hemispheres 15.6
2531 Female, age 67, both hemispheres 11.2
2530 Female, age 94, left hemisphere 8.7
2528 Male, age 74, both hemispheres 8.5
2246 Female, age 85, both hemispheres 7.2
2010 Male, age 76, both hemispheres 5.4
Entorhinal gyrus
nTPM: 9.5
2613 Female, age 94, left hemisphere 16.0
2764 Male, age 80, right hemisphere 12.5
1938 Female, age 85, left hemisphere 9.6
1787 Male, age 76, left hemisphere 8.6
2686 Male, age 75, right hemisphere 8.2
2117 Female, age 91, right hemisphere 2.3
Hippocampus, CA1
nTPM: 9.2
2749 Male, age 80, left hemisphere 16.6
2527 Male, age 74, both hemispheres 9.9
2045 Male, age 76, both hemispheres 8.1
1873 Female, age 85, both hemispheres 6.2
2082 Female, age 91, right hemisphere 5.1
Hippocampus, CA2
nTPM: 8.4
2437 Female, age 94, left hemisphere 12.7
1892 Male, age 76, both hemispheres 11.4
2249 Male, age 74, both hemispheres 10.4
1963 Male, age 80, left hemisphere 7.6
1940 Female, age 85, left hemisphere 5.0
2113 Female, age 91, right hemisphere 3.4
Hippocampus, CA3
nTPM: 9.0
2137 Male, age 80, left hemisphere 11.6
2436 Male, age 74, both hemispheres 11.5
2620 Female, age 94, left hemisphere 11.2
2861 Female, age 67, both hemispheres 8.8
1867 Male, age 76, both hemispheres 7.9
1891 Female, age 85, both hemispheres 3.0
Parahippocampal cortex
nTPM: 10.3
2250 Female, age 67, right hemisphere 13.4
1850 Male, age 80, both hemispheres 13.0
2693 Female, age 94, both hemispheres 12.8
2245 Female, age 91, both hemispheres 12.4
1990 Female, age 91, right hemisphere 12.0
1933 Female, age 85, both hemispheres 11.0
2622 Female, age 67, right hemisphere 10.2
2532 Female, age 72, left hemisphere 8.2
2692 Male, age 74, both hemispheres 5.0
2018 Male, age 76, both hemispheres 4.7
Perirhinal gyrus
nTPM: 15.4
2521 Female, age 94, right hemisphere 21.6
1847 Female, age 91, left hemisphere 20.2
1794 Male, age 80, right hemisphere 14.6
1841 Female, age 85, right hemisphere 13.1
2848 Male, age 76, right hemisphere 7.3
Subiculum
nTPM: 5.4
2619 Male, age 74, both hemispheres 9.0
2438 Female, age 94, left hemisphere 8.7
1977 Female, age 85, both hemispheres 8.0
1901 Male, age 80, both hemispheres 5.6
2729 Female, age 91, right hemisphere 1.2
2042 Male, age 76, both hemispheres 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.0
Samples: 197

Max nTPM: 38.8
Min nTPM: 1.6
Std nTPM: 7.3
Median nTPM: 13.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 38.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 33.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 32.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 32.7
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 30.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 30.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 30.0
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 29.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 29.3
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 29.1
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 28.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.6
FF:10169-103B7 60 years, female 24.0
FF:10153-102I9 76 years, female 19.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 55.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 49.1
Samples: 4

Max nTPM: 58.6
Min nTPM: 40.4
Sample A Female 58.6
Sample B Female 54.6
Sample C Male 42.8
Sample D Male 40.4
Entorhinal cortex
nTPM: 55.3
Samples: 4

Max nTPM: 63.6
Min nTPM: 48.5
Sample A Female 63.6
Sample B Female 48.5
Sample C Male 58.5
Sample D Male 50.5
Subiculum
nTPM: 49.0
Samples: 4

Max nTPM: 63.0
Min nTPM: 42.0
Sample A Female 63.0
Sample B Female 42.0
Sample C Male 42.9
Sample D Male 48.1
Ventral hippocampus
nTPM: 42.7
Samples: 4

Max nTPM: 52.5
Min nTPM: 29.0
Sample A Female 44.0
Sample B Female 29.0
Sample C Male 45.1
Sample D Male 52.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 73.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 73.8
Samples: 4

Max nTPM: 91.5
Min nTPM: 65.3
Sample A Male 65.3
Sample B Male 70.2
Sample C Female 68.1
Sample D Female 91.5
Hippocampal formation
nTPM: 65.6
Samples: 4

Max nTPM: 69.3
Min nTPM: 59.2
Sample A Male 67.7
Sample B Male 66.2
Sample C Female 69.3
Sample D Female 59.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.9
74821680 Antisense, RP_060321_02_B12, Mouse strain C57BL/6J (56 days, male) 6.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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