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PPP2R5B
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:38.8 nTPM
HPA:38.8 nTPM
GTEx:42.1 nTPM
FANTOM5:52.7 Scaled Tags Per Million
Pig:57.1 nTPM
Mouse:69.2 nTPM
Allen mouse:7.8 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 38.8
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 36.2
2666 Male, age 74, left hemisphere 48.1
2586 Male, age 75, left hemisphere 42.7
2828 Female, age 72, unknown 40.4
1827 Male, age 72, unknown 38.2
2219 Male, age 76, both hemispheres 37.6
2411 Female, age 72, unknown 34.3
1870 Female, age 42, unknown 31.0
2019 Male, age 18, unknown 30.4
1833 Male, age 53, unknown 30.3
1830 Male, age 51, unknown 29.0
Dorsal raphe nucleus
nTPM: 31.7
2298 Female, age 72, unknown 35.1
2750 Male, age 76, both hemispheres 34.9
2047 Male, age 72, unknown 33.0
1828 Male, age 53, unknown 30.0
2016 Female, age 72, unknown 25.4
Inferior colliculus
nTPM: 31.5
2849 Male, age 72, unknown 33.8
1848 Female, age 42, unknown 31.8
2097 Female, age 72, unknown 31.8
1890 Male, age 53, unknown 28.5
Median raphe nucleus
nTPM: 36.6
2220 Male, age 76, midline 36.6
Pedunculopontine tegmental nucleus
nTPM: 34.6
1921 Female, age 85, both hemispheres 38.5
2334 Male, age 80, both hemispheres 32.8
2338 Male, age 61, both hemispheres 32.5
Periaquaductal grey, anterior
nTPM: 37.7
1795 Male, age 51, unknown 41.0
1947 Male, age 18, unknown 37.5
2502 Female, age 75, unknown 34.6
Periaquaductal grey, dorsal
nTPM: 29.8
2464 Female, age 72, unknown 31.4
1840 Male, age 53, unknown 30.6
1831 Male, age 72, unknown 30.4
2850 Male, age 76, both hemispheres 26.7
Periaquaductal grey, lateral
nTPM: 27.0
2053 Male, age 18, unknown 31.0
2140 Male, age 76, both hemispheres 26.0
2272 Male, age 74, both hemispheres 23.9
Pretectal area
nTPM: 38.4
1816 Male, age 51, unknown 50.4
1944 Female, age 72, unknown 46.4
2007 Male, age 72, unknown 44.8
1815 Male, age 53, unknown 44.5
1817 Female, age 42, unknown 42.9
2667 Female, age 75, unknown 36.8
2407 Male, age 75, both hemispheres 36.4
2825 Male, age 18, unknown 34.3
2316 Male, age 76, right hemisphere 34.0
2224 Female, age 72, unknown 29.8
2273 Male, age 74, both hemispheres 21.8
Red nucleus
nTPM: 31.8
2584 Male, age 75, left hemisphere 39.4
2588 Male, age 74, left hemisphere 34.6
2785 Male, age 18, unknown 34.6
2823 Male, age 76, right hemisphere 33.7
1904 Male, age 53, unknown 31.6
2725 Female, age 75, unknown 31.4
1821 Female, age 72, unknown 31.1
2769 Male, age 72, unknown 30.6
2227 Male, age 72, unknown 29.1
1954 Female, age 42, unknown 29.0
2503 Female, age 72, unknown 28.8
1865 Male, age 51, unknown 27.6
Substantia nigra
nTPM: 38.8
1916 Female, age 42, unknown 47.0
2665 Male, age 74, both hemispheres 46.8
1941 Male, age 53, unknown 42.6
1889 Female, age 72, unknown 40.3
1851 Male, age 51, unknown 39.5
2583 Male, age 75, right hemisphere 38.9
2699 Male, age 18, unknown 34.9
2241 Male, age 72, unknown 34.2
2590 Female, age 75, unknown 31.9
2409 Female, age 72, unknown 31.6
Superior colliculus
nTPM: 36.6
2668 Female, age 75, unknown 48.3
2087 Female, age 72, unknown 42.9
2261 Male, age 18, unknown 40.5
1796 Male, age 53, unknown 39.7
1895 Male, age 76, right hemisphere 36.9
2664 Male, age 75, both hemispheres 36.6
1839 Male, age 51, unknown 32.2
1913 Female, age 42, unknown 31.2
1995 Male, age 72, unknown 30.9
2587 Male, age 74, left hemisphere 26.8
Ventral tegmental area
nTPM: 34.2
2410 Female, age 72, unknown 39.2
2218 Male, age 76, both hemispheres 37.9
1915 Female, age 42, unknown 36.9
1942 Male, age 51, unknown 35.5
2021 Male, age 53, unknown 30.8
2223 Female, age 72, unknown 25.1

MIDBRAIN - GTEx RNA-seqi
Average nTPM 42.1
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 42.1
Samples: 139

Max nTPM: 114.4
Min nTPM: 17.4
Std nTPM: 16.3
Median nTPM: 39.7
GTEX-Z93S-0011-R2a-SM-4RGNG 50-59 years, male 114.4
GTEX-15ER7-0011-R2a-SM-6M46O 20-29 years, female 82.1
GTEX-1B8L1-0011-R2a-SM-9OSVL 60-69 years, male 81.6
GTEX-1313W-0011-R2a-SM-5EGLF 50-59 years, female 74.7
GTEX-1GN73-0011-R2a-SM-CJI2V 60-69 years, male 72.4
GTEX-15DYW-0011-R2b-SM-7KUKY 60-69 years, female 72.2
GTEX-13OW6-0011-R2a-SM-5L3HG 50-59 years, male 71.8
GTEX-1HT8W-0011-R2a-SM-CMKH9 30-39 years, male 71.8
GTEX-1LH75-0011-R2b-SM-EYYWQ 50-59 years, female 70.2
GTEX-11GSP-0011-R2b-SM-9QEGE 60-69 years, female 68.5
GTEX-1EMGI-0011-R2b-SM-9OSVS 60-69 years, male 68.5
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 52.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 52.7
FF:10158-103A5 76 years, female 52.7

MIDBRAIN - Pig RNA-seqi
Average nTPM 57.1
Pig sample Sample description nTPM
Midbrain
nTPM: 57.1
Samples: 4

Max nTPM: 94.1
Min nTPM: 40.7
Sample A Female 42.4
Sample B Female 40.7
Sample C Male 94.1
Sample D Male 51.3
Periaqueductal gray
nTPM: 36.1
Samples: 3

Max nTPM: 42.2
Min nTPM: 31.5
Sample B Female 34.6
Sample C Male 42.2
Sample D Male 31.5
Substantia nigra
nTPM: 49.8
Samples: 4

Max nTPM: 62.5
Min nTPM: 37.4
Sample A Female 62.5
Sample B Female 37.4
Sample C Male 59.5
Sample D Male 39.7
Superior colliculi
nTPM: 55.2
Samples: 4

Max nTPM: 74.2
Min nTPM: 39.8
Sample A Female 49.7
Sample B Female 39.8
Sample C Male 74.2
Sample D Male 56.9

MIDBRAIN - Mouse RNA-seqi
Average nTPM 69.2
Mouse sample Sample description nTPM
Midbrain
nTPM: 69.2
Samples: 4

Max nTPM: 73.2
Min nTPM: 66.2
Sample A Male 73.2
Sample B Male 66.2
Sample C Female 66.3
Sample D Female 71.2

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 7.8
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 7.8
68844032 Antisense, RP_050217_02_G06, Mouse strain C57BL/6J (56 days, male) 9.8
74819327 Antisense, RP_060315_02_E03, Mouse strain C57BL/6J (56 days, male) 5.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.