ABOUTMENU
HELP
NEWS
NDST1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:30.8 nTPM
HPA:30.8 nTPM
GTEx:25.4 nTPM
FANTOM5:39.3 Scaled Tags Per Million
Pig:29.6 nTPM
Mouse:44.4 nTPM
Allen mouse:3.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA060532
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.8
Sample id Sample description nTPM
Hippocampus
nTPM: 29.2
2529 Female, age 94, left hemisphere 35.7
1911 Female, age 85, right hemisphere 29.0
2621 Female, age 67, right hemisphere 28.8
2148 Female, age 91, left hemisphere 28.4
1898 Male, age 80, left hemisphere 27.9
1855 Male, age 76, left hemisphere 25.8
Dentate gyrus
nTPM: 26.2
2530 Female, age 94, left hemisphere 35.2
2531 Female, age 67, both hemispheres 29.1
2528 Male, age 74, both hemispheres 25.8
2010 Male, age 76, both hemispheres 24.4
2246 Female, age 85, both hemispheres 21.7
1927 Female, age 91, both hemispheres 21.0
Entorhinal gyrus
nTPM: 30.8
2117 Female, age 91, right hemisphere 38.2
2613 Female, age 94, left hemisphere 36.0
2764 Male, age 80, right hemisphere 32.0
2686 Male, age 75, right hemisphere 27.1
1787 Male, age 76, left hemisphere 26.6
1938 Female, age 85, left hemisphere 24.8
Hippocampus, CA1
nTPM: 27.9
2749 Male, age 80, left hemisphere 37.9
2527 Male, age 74, both hemispheres 29.8
2045 Male, age 76, both hemispheres 25.4
1873 Female, age 85, both hemispheres 24.7
2082 Female, age 91, right hemisphere 21.6
Hippocampus, CA2
nTPM: 26.8
1963 Male, age 80, left hemisphere 38.0
2437 Female, age 94, left hemisphere 30.6
2113 Female, age 91, right hemisphere 24.6
2249 Male, age 74, both hemispheres 24.3
1940 Female, age 85, left hemisphere 22.1
1892 Male, age 76, both hemispheres 20.9
Hippocampus, CA3
nTPM: 28.8
2861 Female, age 67, both hemispheres 37.5
2137 Male, age 80, left hemisphere 35.2
2620 Female, age 94, left hemisphere 34.4
1891 Female, age 85, both hemispheres 27.7
1867 Male, age 76, both hemispheres 22.8
2436 Male, age 74, both hemispheres 15.2
Parahippocampal cortex
nTPM: 22.8
2692 Male, age 74, both hemispheres 28.9
2245 Female, age 91, both hemispheres 25.5
2018 Male, age 76, both hemispheres 25.4
1933 Female, age 85, both hemispheres 23.4
2622 Female, age 67, right hemisphere 22.7
1990 Female, age 91, right hemisphere 21.2
2532 Female, age 72, left hemisphere 20.9
2250 Female, age 67, right hemisphere 20.8
2693 Female, age 94, both hemispheres 20.4
1850 Male, age 80, both hemispheres 18.8
Perirhinal gyrus
nTPM: 19.3
2521 Female, age 94, right hemisphere 24.3
1794 Male, age 80, right hemisphere 22.2
1847 Female, age 91, left hemisphere 20.2
2848 Male, age 76, right hemisphere 16.3
1841 Female, age 85, right hemisphere 13.6
Subiculum
nTPM: 28.9
2042 Male, age 76, both hemispheres 34.1
2729 Female, age 91, right hemisphere 31.8
1901 Male, age 80, both hemispheres 31.3
1977 Female, age 85, both hemispheres 29.5
2619 Male, age 74, both hemispheres 27.6
2438 Female, age 94, left hemisphere 19.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.4
Samples: 197

Max nTPM: 45.9
Min nTPM: 8.3
Std nTPM: 6.3
Median nTPM: 24.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 45.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 45.9
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 45.7
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 43.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 43.3
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 42.2
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 40.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 39.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 38.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 37.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 37.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 39.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 39.3
FF:10153-102I9 76 years, female 50.4
FF:10169-103B7 60 years, female 28.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 26.4
Samples: 4

Max nTPM: 32.1
Min nTPM: 20.1
Sample A Female 32.1
Sample B Female 27.8
Sample C Male 25.4
Sample D Male 20.1
Entorhinal cortex
nTPM: 29.6
Samples: 4

Max nTPM: 35.0
Min nTPM: 24.6
Sample A Female 31.0
Sample B Female 24.6
Sample C Male 35.0
Sample D Male 27.9
Subiculum
nTPM: 27.8
Samples: 4

Max nTPM: 37.2
Min nTPM: 21.8
Sample A Female 37.2
Sample B Female 24.4
Sample C Male 27.8
Sample D Male 21.8
Ventral hippocampus
nTPM: 29.1
Samples: 4

Max nTPM: 38.5
Min nTPM: 21.9
Sample A Female 25.4
Sample B Female 21.9
Sample C Male 38.5
Sample D Male 30.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 44.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.0
Samples: 4

Max nTPM: 50.1
Min nTPM: 38.1
Sample A Male 43.3
Sample B Male 38.1
Sample C Female 40.5
Sample D Female 50.1
Hippocampal formation
nTPM: 44.5
Samples: 4

Max nTPM: 53.7
Min nTPM: 37.8
Sample A Male 37.8
Sample B Male 47.2
Sample C Female 53.7
Sample D Female 39.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.4
71234609 Antisense, RP_050505_02_D03, Mouse strain C57BL/6J (56 days, male) 3.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.