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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:62.6 nTPM
HPA:62.6 nTPM
GTEx:74.4 nTPM
FANTOM5:0.5 Scaled Tags Per Million
Pig:61.4 nTPM
Mouse:92.6 nTPM
Allen mouse:9.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049809
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 62.6
Sample id Sample description nTPM
Hippocampus
nTPM: 60.5
2529 Female, age 94, left hemisphere 69.1
1911 Female, age 85, right hemisphere 65.0
2148 Female, age 91, left hemisphere 61.3
1855 Male, age 76, left hemisphere 61.2
2621 Female, age 67, right hemisphere 60.6
1898 Male, age 80, left hemisphere 45.5
Dentate gyrus
nTPM: 59.9
2530 Female, age 94, left hemisphere 73.2
2531 Female, age 67, both hemispheres 61.3
2010 Male, age 76, both hemispheres 58.9
1927 Female, age 91, both hemispheres 58.0
2246 Female, age 85, both hemispheres 56.7
2528 Male, age 74, both hemispheres 51.5
Entorhinal gyrus
nTPM: 60.0
2613 Female, age 94, left hemisphere 71.8
2686 Male, age 75, right hemisphere 63.9
2764 Male, age 80, right hemisphere 60.6
2117 Female, age 91, right hemisphere 58.3
1787 Male, age 76, left hemisphere 54.0
1938 Female, age 85, left hemisphere 51.3
Hippocampus, CA1
nTPM: 57.2
2749 Male, age 80, left hemisphere 61.0
2527 Male, age 74, both hemispheres 58.8
2045 Male, age 76, both hemispheres 57.6
2082 Female, age 91, right hemisphere 55.1
1873 Female, age 85, both hemispheres 53.5
Hippocampus, CA2
nTPM: 56.3
2437 Female, age 94, left hemisphere 66.9
1963 Male, age 80, left hemisphere 64.2
2113 Female, age 91, right hemisphere 58.3
1892 Male, age 76, both hemispheres 51.1
2249 Male, age 74, both hemispheres 49.3
1940 Female, age 85, left hemisphere 47.8
Hippocampus, CA3
nTPM: 55.8
2620 Female, age 94, left hemisphere 64.9
2861 Female, age 67, both hemispheres 61.1
2137 Male, age 80, left hemisphere 57.9
1891 Female, age 85, both hemispheres 56.0
1867 Male, age 76, both hemispheres 52.1
2436 Male, age 74, both hemispheres 43.0
Parahippocampal cortex
nTPM: 54.1
2692 Male, age 74, both hemispheres 69.3
2622 Female, age 67, right hemisphere 60.0
2532 Female, age 72, left hemisphere 58.5
2018 Male, age 76, both hemispheres 57.5
1990 Female, age 91, right hemisphere 53.7
2245 Female, age 91, both hemispheres 52.3
1933 Female, age 85, both hemispheres 48.3
2250 Female, age 67, right hemisphere 47.4
2693 Female, age 94, both hemispheres 47.2
1850 Male, age 80, both hemispheres 46.9
Perirhinal gyrus
nTPM: 45.1
1847 Female, age 91, left hemisphere 51.5
2521 Female, age 94, right hemisphere 49.2
2848 Male, age 76, right hemisphere 44.6
1794 Male, age 80, right hemisphere 41.4
1841 Female, age 85, right hemisphere 38.7
Subiculum
nTPM: 62.6
2438 Female, age 94, left hemisphere 69.9
2042 Male, age 76, both hemispheres 65.5
2619 Male, age 74, both hemispheres 63.6
1901 Male, age 80, both hemispheres 61.7
2729 Female, age 91, right hemisphere 57.7
1977 Female, age 85, both hemispheres 57.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 74.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 74.4
Samples: 197

Max nTPM: 134.9
Min nTPM: 19.9
Std nTPM: 22.3
Median nTPM: 71.5
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 134.9
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 134.8
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 132.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 129.5
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 125.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 122.1
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 120.5
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 119.4
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 117.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 115.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 115.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 0.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 0.5
FF:10153-102I9 76 years, female 1.0
FF:10169-103B7 60 years, female 0.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 61.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 61.4
Samples: 4

Max nTPM: 90.0
Min nTPM: 42.4
Sample A Female 90.0
Sample B Female 69.3
Sample C Male 43.8
Sample D Male 42.4
Entorhinal cortex
nTPM: 41.5
Samples: 4

Max nTPM: 46.5
Min nTPM: 35.5
Sample A Female 42.4
Sample B Female 41.4
Sample C Male 46.5
Sample D Male 35.5
Subiculum
nTPM: 41.9
Samples: 4

Max nTPM: 61.1
Min nTPM: 28.9
Sample A Female 61.1
Sample B Female 38.7
Sample C Male 38.8
Sample D Male 28.9
Ventral hippocampus
nTPM: 56.3
Samples: 4

Max nTPM: 78.8
Min nTPM: 39.1
Sample A Female 47.6
Sample B Female 39.1
Sample C Male 59.5
Sample D Male 78.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 92.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 68.9
Samples: 4

Max nTPM: 75.8
Min nTPM: 66.0
Sample A Male 67.4
Sample B Male 66.4
Sample C Female 75.8
Sample D Female 66.0
Hippocampal formation
nTPM: 92.7
Samples: 4

Max nTPM: 101.6
Min nTPM: 86.4
Sample A Male 86.4
Sample B Male 96.2
Sample C Female 101.6
Sample D Female 86.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.7
68632002 Antisense, RP_050125_01_E06, Mouse strain C57BL/6J (56 days, male) 9.7

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The Human Protein Atlas

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