ABOUTMENU
HELP
NEWS
CLASP1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:19.7 nTPM
HPA:19.7 nTPM
GTEx:14.8 nTPM
FANTOM5:49.2 Scaled Tags Per Million
Pig:41.5 nTPM
Mouse:19.7 nTPM
Allen mouse:3.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA065219
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.7
Sample id Sample description nTPM
Hippocampus
nTPM: 14.7
2148 Female, age 91, left hemisphere 17.9
2621 Female, age 67, right hemisphere 16.8
1898 Male, age 80, left hemisphere 15.2
2529 Female, age 94, left hemisphere 14.0
1855 Male, age 76, left hemisphere 13.7
1911 Female, age 85, right hemisphere 10.5
Dentate gyrus
nTPM: 15.6
2531 Female, age 67, both hemispheres 20.5
1927 Female, age 91, both hemispheres 18.3
2246 Female, age 85, both hemispheres 16.9
2010 Male, age 76, both hemispheres 13.6
2528 Male, age 74, both hemispheres 13.4
2530 Female, age 94, left hemisphere 11.0
Entorhinal gyrus
nTPM: 15.1
2764 Male, age 80, right hemisphere 18.0
1938 Female, age 85, left hemisphere 17.0
2613 Female, age 94, left hemisphere 15.9
2686 Male, age 75, right hemisphere 14.7
1787 Male, age 76, left hemisphere 13.1
2117 Female, age 91, right hemisphere 11.7
Hippocampus, CA1
nTPM: 18.4
2749 Male, age 80, left hemisphere 22.6
2045 Male, age 76, both hemispheres 21.2
1873 Female, age 85, both hemispheres 17.7
2527 Male, age 74, both hemispheres 16.7
2082 Female, age 91, right hemisphere 13.9
Hippocampus, CA2
nTPM: 12.9
1963 Male, age 80, left hemisphere 16.5
1892 Male, age 76, both hemispheres 13.5
2113 Female, age 91, right hemisphere 13.2
1940 Female, age 85, left hemisphere 12.3
2249 Male, age 74, both hemispheres 11.2
2437 Female, age 94, left hemisphere 10.5
Hippocampus, CA3
nTPM: 17.3
2620 Female, age 94, left hemisphere 26.4
2861 Female, age 67, both hemispheres 19.1
2137 Male, age 80, left hemisphere 19.0
2436 Male, age 74, both hemispheres 14.0
1891 Female, age 85, both hemispheres 12.6
1867 Male, age 76, both hemispheres 12.5
Parahippocampal cortex
nTPM: 15.9
1850 Male, age 80, both hemispheres 20.1
2622 Female, age 67, right hemisphere 17.5
2693 Female, age 94, both hemispheres 16.3
2532 Female, age 72, left hemisphere 16.2
1933 Female, age 85, both hemispheres 16.0
2692 Male, age 74, both hemispheres 15.9
2245 Female, age 91, both hemispheres 15.8
1990 Female, age 91, right hemisphere 15.0
2250 Female, age 67, right hemisphere 14.8
2018 Male, age 76, both hemispheres 11.3
Perirhinal gyrus
nTPM: 19.7
1794 Male, age 80, right hemisphere 22.6
1847 Female, age 91, left hemisphere 21.2
1841 Female, age 85, right hemisphere 19.7
2521 Female, age 94, right hemisphere 18.2
2848 Male, age 76, right hemisphere 16.9
Subiculum
nTPM: 12.5
2619 Male, age 74, both hemispheres 15.1
1977 Female, age 85, both hemispheres 14.2
2729 Female, age 91, right hemisphere 13.5
2438 Female, age 94, left hemisphere 13.3
1901 Male, age 80, both hemispheres 12.1
2042 Male, age 76, both hemispheres 7.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.8
Samples: 197

Max nTPM: 25.4
Min nTPM: 8.5
Std nTPM: 3.4
Median nTPM: 14.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 25.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 24.9
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 24.7
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 23.9
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 23.9
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 23.5
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 22.9
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 22.7
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 22.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 22.2
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 22.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.2
FF:10169-103B7 60 years, female 58.5
FF:10153-102I9 76 years, female 39.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 41.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 32.1
Samples: 4

Max nTPM: 35.9
Min nTPM: 28.5
Sample A Female 35.9
Sample B Female 34.9
Sample C Male 28.9
Sample D Male 28.5
Entorhinal cortex
nTPM: 33.7
Samples: 4

Max nTPM: 35.3
Min nTPM: 32.1
Sample A Female 33.6
Sample B Female 32.1
Sample C Male 35.3
Sample D Male 33.8
Subiculum
nTPM: 41.5
Samples: 4

Max nTPM: 50.8
Min nTPM: 35.5
Sample A Female 50.8
Sample B Female 39.8
Sample C Male 39.9
Sample D Male 35.5
Ventral hippocampus
nTPM: 33.0
Samples: 4

Max nTPM: 39.7
Min nTPM: 30.5
Sample A Female 30.5
Sample B Female 30.8
Sample C Male 39.7
Sample D Male 30.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.7
Samples: 4

Max nTPM: 25.7
Min nTPM: 15.2
Sample A Male 18.8
Sample B Male 19.0
Sample C Female 15.2
Sample D Female 25.7
Hippocampal formation
nTPM: 14.2
Samples: 4

Max nTPM: 15.4
Min nTPM: 12.7
Sample A Male 13.9
Sample B Male 15.4
Sample C Female 14.9
Sample D Female 12.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.8
73811573 Antisense, RP_051212_03_D12, Mouse strain C57BL/6J (56 days, male) 3.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.