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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		146.516
RNA expressioni
Consensus:81.7 nTPM
HPA:81.7 nTPM
GTEx:375.9 nTPM
FANTOM5:191.3 Scaled Tags Per Million
Pig:61.6 nTPM
Mouse:366.9 nTPM
Allen mouse:24.9 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA035876
Amygdala mean intensity 146.516
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract -
Basal medial amygdaloid nucleus 122.124
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 128.812
Cortical amygdala 101.617
Central amygdala 146.516
Medial amygdaloid nucleus 124.936

AMYGDALA - HPA Brain RNA-seq
Max nTPM 81.7
Sample id Sample description nTPM
Amygdala
nTPM: 22.6
2814 Male, age 76, right hemisphere 83.0
2517 Female, age 94, left hemisphere 17.8
1987 Female, age 91, left hemisphere 12.0
2514 Male, age 75, right hemisphere 0.0
2695 Female, age 67, right hemisphere 0.0
Basal amygdala
nTPM: 58.2
2243 Female, age 91, right hemisphere 117.6
2685 Female, age 94, left hemisphere 100.4
1955 Male, age 76, both hemispheres 63.6
2110 Male, age 80, left hemisphere 53.4
2827 Female, age 67, right hemisphere 14.1
2609 Male, age 75, right hemisphere 0.0
Central amygdala
nTPM: 41.9
2826 Female, age 94, left hemisphere 78.3
1905 Male, age 76, both hemispheres 65.8
2239 Male, age 80, left hemisphere 50.3
2701 Female, age 91, right hemisphere 15.2
2515 Male, age 75, right hemisphere 0.0
Corticomedial amygdala
nTPM: 56.7
2829 Male, age 80, left hemisphere 77.7
2242 Female, age 91, right hemisphere 75.7
2535 Female, age 67, right hemisphere 73.2
2429 Female, age 94, left hemisphere 67.5
2240 Male, age 76, both hemispheres 46.4
2428 Male, age 75, right hemisphere 0.0
Lateral amygdala
nTPM: 34.8
2534 Female, age 94, left hemisphere 109.9
1883 Male, age 76, both hemispheres 71.9
2255 Female, age 91, right hemisphere 15.9
2256 Male, age 80, left hemisphere 11.1
2516 Male, age 75, right hemisphere 0.0
2830 Female, age 67, right hemisphere 0.0
Stria terminalis, bed nucleus
nTPM: 81.7
1974 Female, age 91, both hemispheres 154.2
2486 Female, age 94, both hemispheres 77.4
2201 Male, age 74, unknown 13.5

AMYGDALA - GTEx RNA-seqi
Average nTPM 375.9
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 375.9
Samples: 152

Max nTPM: 1064.7
Min nTPM: 8.4
Std nTPM: 197.7
Median nTPM: 337.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 1064.7
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 917.2
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 913.9
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 891.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 772.9
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 771.5
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 765.4
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 727.9
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 714.0
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 678.1
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 661.3
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 191.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 191.3
FF:10151-102I7 76 years, female 191.3

AMYGDALA - Pig RNA-seqi
Average nTPM 61.6
Pig sample Sample description nTPM
Amygdala
nTPM: 61.6
Samples: 4

Max nTPM: 92.6
Min nTPM: 38.4
Sample A Female 92.6
Sample B Female 38.4
Sample C Male 51.2
Sample D Male 64.2

AMYGDALA - Mouse RNA-seqi
Average nTPM 366.9
Mouse sample Sample description nTPM
Amygdala
nTPM: 366.9
Samples: 4

Max nTPM: 417.8
Min nTPM: 324.0
Sample A Male 392.2
Sample B Male 333.7
Sample C Female 417.8
Sample D Female 324.0

AMYGDALA - Allen Mouse ISHi
Max Expression energy 24.9
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 24.9
100144408 Antisense, RP_110407_01_G07, Mouse strain C57BL/6J (56 days, male) 24.9

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.