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HACD3
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:54.3 nTPM
HPA:54.3 nTPM
GTEx:47.5 nTPM
FANTOM5:153.1 Scaled Tags Per Million
Pig:72.2 nTPM
Mouse:169.7 nTPM
Allen mouse:10.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014837
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 54.3
Sample id Sample description nTPM
Hippocampus
nTPM: 51.4
1898 Male, age 80, left hemisphere 58.4
2529 Female, age 94, left hemisphere 53.0
2148 Female, age 91, left hemisphere 52.0
1911 Female, age 85, right hemisphere 49.3
1855 Male, age 76, left hemisphere 49.1
2621 Female, age 67, right hemisphere 46.6
Dentate gyrus
nTPM: 50.0
2528 Male, age 74, both hemispheres 55.8
1927 Female, age 91, both hemispheres 55.0
2246 Female, age 85, both hemispheres 53.9
2010 Male, age 76, both hemispheres 49.5
2530 Female, age 94, left hemisphere 44.0
2531 Female, age 67, both hemispheres 41.7
Entorhinal gyrus
nTPM: 47.3
2117 Female, age 91, right hemisphere 56.3
1938 Female, age 85, left hemisphere 52.5
2764 Male, age 80, right hemisphere 49.2
1787 Male, age 76, left hemisphere 46.9
2613 Female, age 94, left hemisphere 40.1
2686 Male, age 75, right hemisphere 38.6
Hippocampus, CA1
nTPM: 54.3
2749 Male, age 80, left hemisphere 59.1
1873 Female, age 85, both hemispheres 57.4
2527 Male, age 74, both hemispheres 56.9
2045 Male, age 76, both hemispheres 51.6
2082 Female, age 91, right hemisphere 46.4
Hippocampus, CA2
nTPM: 51.0
2249 Male, age 74, both hemispheres 56.7
1892 Male, age 76, both hemispheres 55.8
1963 Male, age 80, left hemisphere 53.9
1940 Female, age 85, left hemisphere 47.6
2113 Female, age 91, right hemisphere 47.5
2437 Female, age 94, left hemisphere 44.2
Hippocampus, CA3
nTPM: 52.7
2436 Male, age 74, both hemispheres 60.3
2620 Female, age 94, left hemisphere 59.9
1891 Female, age 85, both hemispheres 53.4
1867 Male, age 76, both hemispheres 50.7
2137 Male, age 80, left hemisphere 50.7
2861 Female, age 67, both hemispheres 41.0
Parahippocampal cortex
nTPM: 48.9
1850 Male, age 80, both hemispheres 55.2
2250 Female, age 67, right hemisphere 55.0
1933 Female, age 85, both hemispheres 53.8
1990 Female, age 91, right hemisphere 49.4
2245 Female, age 91, both hemispheres 48.8
2693 Female, age 94, both hemispheres 46.7
2532 Female, age 72, left hemisphere 46.3
2692 Male, age 74, both hemispheres 45.7
2622 Female, age 67, right hemisphere 44.2
2018 Male, age 76, both hemispheres 43.6
Perirhinal gyrus
nTPM: 53.4
1794 Male, age 80, right hemisphere 55.9
1847 Female, age 91, left hemisphere 54.4
1841 Female, age 85, right hemisphere 54.3
2521 Female, age 94, right hemisphere 52.6
2848 Male, age 76, right hemisphere 49.5
Subiculum
nTPM: 48.5
2729 Female, age 91, right hemisphere 52.3
2619 Male, age 74, both hemispheres 52.2
1977 Female, age 85, both hemispheres 51.4
2438 Female, age 94, left hemisphere 47.2
1901 Male, age 80, both hemispheres 46.8
2042 Male, age 76, both hemispheres 41.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 47.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.5
Samples: 197

Max nTPM: 85.8
Min nTPM: 19.1
Std nTPM: 12.3
Median nTPM: 47.1
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 85.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 79.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 79.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 74.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 71.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 71.2
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 69.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 68.6
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 66.5
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 66.2
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 65.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 153.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 153.1
FF:10169-103B7 60 years, female 197.7
FF:10153-102I9 76 years, female 108.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 72.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 71.7
Samples: 4

Max nTPM: 82.7
Min nTPM: 62.4
Sample A Female 82.7
Sample B Female 77.3
Sample C Male 64.3
Sample D Male 62.4
Entorhinal cortex
nTPM: 60.7
Samples: 4

Max nTPM: 70.6
Min nTPM: 50.4
Sample A Female 59.0
Sample B Female 70.6
Sample C Male 62.7
Sample D Male 50.4
Subiculum
nTPM: 72.0
Samples: 4

Max nTPM: 80.5
Min nTPM: 65.2
Sample A Female 80.5
Sample B Female 76.2
Sample C Male 66.0
Sample D Male 65.2
Ventral hippocampus
nTPM: 72.2
Samples: 4

Max nTPM: 80.1
Min nTPM: 62.8
Sample A Female 80.1
Sample B Female 62.8
Sample C Male 78.6
Sample D Male 67.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 169.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 169.7
Samples: 4

Max nTPM: 186.8
Min nTPM: 155.6
Sample A Male 155.6
Sample B Male 161.7
Sample C Female 174.8
Sample D Female 186.8
Hippocampal formation
nTPM: 166.5
Samples: 4

Max nTPM: 175.6
Min nTPM: 157.6
Sample A Male 175.6
Sample B Male 157.6
Sample C Female 168.8
Sample D Female 163.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.5
67765732 Antisense, RP_040916_01_G05, Mouse strain C57BL/6J (56 days, male) 10.5

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