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SLC25A3
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:149.6 nTPM
HPA:149.6 nTPM
GTEx:208.3 nTPM
FANTOM5:154.5 Scaled Tags Per Million
Pig:218.3 nTPM
Mouse:308.0 nTPM
Allen mouse:15.4 Expression energy

MIDBRAIN - Annotated protein expression
Pending normal tissue analysis

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 149.6
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 128.8
2019 Male, age 18, unknown 148.6
2586 Male, age 75, left hemisphere 139.3
1827 Male, age 72, unknown 138.7
2411 Female, age 72, unknown 136.3
2828 Female, age 72, unknown 128.5
2666 Male, age 74, left hemisphere 125.6
2219 Male, age 76, both hemispheres 120.8
1870 Female, age 42, unknown 119.9
1833 Male, age 53, unknown 116.9
1830 Male, age 51, unknown 113.4
Dorsal raphe nucleus
nTPM: 132.3
2298 Female, age 72, unknown 149.1
1828 Male, age 53, unknown 143.0
2047 Male, age 72, unknown 138.6
2016 Female, age 72, unknown 116.3
2750 Male, age 76, both hemispheres 114.3
Inferior colliculus
nTPM: 132.6
2097 Female, age 72, unknown 151.8
1890 Male, age 53, unknown 139.1
1848 Female, age 42, unknown 127.9
2849 Male, age 72, unknown 111.5
Median raphe nucleus
nTPM: 113.3
2220 Male, age 76, midline 113.3
Pedunculopontine tegmental nucleus
nTPM: 123.1
1921 Female, age 85, both hemispheres 131.6
2334 Male, age 80, both hemispheres 129.9
2338 Male, age 61, both hemispheres 107.9
Periaquaductal grey, anterior
nTPM: 132.0
1795 Male, age 51, unknown 134.9
2502 Female, age 75, unknown 131.4
1947 Male, age 18, unknown 129.7
Periaquaductal grey, dorsal
nTPM: 113.2
1840 Male, age 53, unknown 121.0
1831 Male, age 72, unknown 113.0
2464 Female, age 72, unknown 111.6
2850 Male, age 76, both hemispheres 107.3
Periaquaductal grey, lateral
nTPM: 113.9
2272 Male, age 74, both hemispheres 118.2
2053 Male, age 18, unknown 117.8
2140 Male, age 76, both hemispheres 105.9
Pretectal area
nTPM: 137.3
2007 Male, age 72, unknown 168.1
1816 Male, age 51, unknown 162.9
1817 Female, age 42, unknown 156.1
1944 Female, age 72, unknown 147.4
2667 Female, age 75, unknown 140.9
1815 Male, age 53, unknown 136.7
2224 Female, age 72, unknown 124.3
2273 Male, age 74, both hemispheres 124.0
2825 Male, age 18, unknown 118.5
2316 Male, age 76, right hemisphere 118.0
2407 Male, age 75, both hemispheres 113.4
Red nucleus
nTPM: 131.4
1821 Female, age 72, unknown 157.7
2785 Male, age 18, unknown 147.3
2503 Female, age 72, unknown 144.8
2725 Female, age 75, unknown 136.9
2588 Male, age 74, left hemisphere 132.1
1954 Female, age 42, unknown 126.2
2227 Male, age 72, unknown 126.2
2769 Male, age 72, unknown 126.1
1865 Male, age 51, unknown 122.5
2584 Male, age 75, left hemisphere 119.9
2823 Male, age 76, right hemisphere 118.4
1904 Male, age 53, unknown 118.3
Substantia nigra
nTPM: 149.6
1916 Female, age 42, unknown 186.4
1851 Male, age 51, unknown 160.8
2241 Male, age 72, unknown 158.9
2665 Male, age 74, both hemispheres 153.6
1889 Female, age 72, unknown 152.8
1941 Male, age 53, unknown 151.1
2590 Female, age 75, unknown 136.8
2409 Female, age 72, unknown 136.1
2583 Male, age 75, right hemisphere 133.0
2699 Male, age 18, unknown 126.4
Superior colliculus
nTPM: 125.2
2087 Female, age 72, unknown 144.2
1796 Male, age 53, unknown 135.8
2587 Male, age 74, left hemisphere 133.4
2261 Male, age 18, unknown 125.9
1839 Male, age 51, unknown 124.7
2668 Female, age 75, unknown 124.3
1895 Male, age 76, right hemisphere 123.7
2664 Male, age 75, both hemispheres 122.4
1913 Female, age 42, unknown 110.4
1995 Male, age 72, unknown 107.2
Ventral tegmental area
nTPM: 133.0
2410 Female, age 72, unknown 165.3
1915 Female, age 42, unknown 146.8
2218 Male, age 76, both hemispheres 134.4
1942 Male, age 51, unknown 121.5
2021 Male, age 53, unknown 115.8
2223 Female, age 72, unknown 114.5

MIDBRAIN - GTEx RNA-seqi
Average nTPM 208.3
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 208.3
Samples: 139

Max nTPM: 410.8
Min nTPM: 115.6
Std nTPM: 52.4
Median nTPM: 200.3
GTEX-Z93S-0011-R2a-SM-4RGNG 50-59 years, male 410.8
GTEX-15ER7-0011-R2a-SM-6M46O 20-29 years, female 378.7
GTEX-1B8L1-0011-R2a-SM-9OSVL 60-69 years, male 366.5
GTEX-1H1ZS-0011-R2b-SM-CL54Q 70-79 years, male 363.0
GTEX-14C5O-0011-R2a-SM-5ZZV2 60-69 years, male 334.7
GTEX-1GZ2Q-0011-R2b-SM-9OSWO 40-49 years, male 326.1
GTEX-1B933-0011-R2b-SM-7IGNM 50-59 years, female 313.2
GTEX-1313W-0011-R2a-SM-5EGLF 50-59 years, female 305.5
GTEX-12ZZX-0011-R2a-SM-5EGLG 40-49 years, female 297.2
GTEX-1LVAO-0011-R2a-SM-EYYX1 60-69 years, male 292.4
GTEX-1EMGI-0011-R2b-SM-9OSVS 60-69 years, male 290.7
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 154.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 154.5
FF:10158-103A5 76 years, female 154.5

MIDBRAIN - Pig RNA-seqi
Average nTPM 218.3
Pig sample Sample description nTPM
Midbrain
nTPM: 180.4
Samples: 4

Max nTPM: 219.9
Min nTPM: 149.7
Sample A Female 176.8
Sample B Female 149.7
Sample C Male 219.9
Sample D Male 175.2
Periaqueductal gray
nTPM: 127.3
Samples: 3

Max nTPM: 142.1
Min nTPM: 104.2
Sample B Female 142.1
Sample C Male 135.5
Sample D Male 104.2
Substantia nigra
nTPM: 156.6
Samples: 4

Max nTPM: 221.5
Min nTPM: 117.8
Sample A Female 221.5
Sample B Female 135.6
Sample C Male 151.5
Sample D Male 117.8
Superior colliculi
nTPM: 218.3
Samples: 4

Max nTPM: 258.2
Min nTPM: 171.3
Sample A Female 251.5
Sample B Female 192.1
Sample C Male 258.2
Sample D Male 171.3

MIDBRAIN - Mouse RNA-seqi
Average nTPM 308.0
Mouse sample Sample description nTPM
Midbrain
nTPM: 308.0
Samples: 4

Max nTPM: 316.9
Min nTPM: 296.8
Sample A Male 315.1
Sample B Male 303.2
Sample C Female 316.9
Sample D Female 296.8

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 15.4
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 15.4
972 Antisense, RP_Baylor_102959, Mouse strain C57BL/6J (56 days, male) 15.4
975 Antisense, RP_Baylor_102959, Mouse strain C57BL/6J (56 days, male) 14.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.