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BAZ2A
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:13.3 nTPM
HPA:13.3 nTPM
GTEx:10.1 nTPM
FANTOM5:85.2 Scaled Tags Per Million
Pig:16.1 nTPM
Mouse:11.5 nTPM
Allen mouse:1.9 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 13.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 4.8
2289 Male, age 61, right hemisphere 12.7
1781 Male, age 74, unknown 6.7
2288 Male, age 75, left hemisphere 6.6
2481 Female, age 94, left hemisphere 4.9
1854 Male, age 80, left hemisphere 4.2
2846 Female, age 79, unknown 3.5
1857 Female, age 85, left hemisphere 0.0
2290 Female, age 72, unknown 0.0
Claustrum
nTPM: 11.8
2292 Female, age 85, both hemispheres 19.1
2645 Female, age 72, unknown 16.3
1956 Male, age 74, unknown 14.9
2196 Female, age 79, unknown 12.7
2568 Male, age 61, both hemispheres 12.1
2284 Female, age 91, both hemispheres 11.6
2198 Male, age 80, both hemispheres 8.1
2491 Male, age 75, both hemispheres 6.5
2392 Female, age 94, both hemispheres 4.5
Globus pallidus, externus
nTPM: 11.6
2567 Female, age 72, unknown 20.1
2646 Male, age 61, right hemisphere 17.1
1996 Male, age 80, right hemisphere 8.5
2395 Male, age 75, both hemispheres 8.3
2772 Female, age 79, unknown 4.2
Globus pallidus, internus
nTPM: 13.3
2566 Female, age 72, unknown 24.3
2111 Female, age 85, right hemisphere 18.4
2778 Female, age 91, both hemispheres 14.2
1818 Male, age 74, unknown 11.9
2037 Male, age 80, right hemisphere 10.5
2483 Female, age 94, right hemisphere 7.3
2287 Male, age 75, right hemisphere 6.1
Nucleus accumbens
nTPM: 3.9
2391 Female, age 94, left hemisphere 9.8
2698 Female, age 72, unknown 7.5
2732 Male, age 80, right hemisphere 7.2
1783 Male, age 74, unknown 4.6
1806 Female, age 85, left hemisphere 1.5
2286 Male, age 75, left hemisphere 1.0
1856 Female, age 91, right hemisphere 0.0
2824 Male, age 61, right hemisphere 0.0
Nucleus basalis of Meynert
nTPM: 7.9
2569 Male, age 61, both hemispheres 15.2
2821 Male, age 75, both hemispheres 10.9
2484 Female, age 94, left hemisphere 4.4
2393 Male, age 80, right hemisphere 1.1
Nucleus of the diagonal band
nTPM: 3.2
1979 Male, age 74, unknown 6.7
2195 Female, age 85, both hemispheres 5.5
2029 Male, age 61, right hemisphere 2.1
1812 Female, age 91, both hemispheres 1.2
2775 Male, age 80, right hemisphere 0.5
Olfactory tubercle
nTPM: 2.9
2856 Male, age 75, right hemisphere 5.7
1846 Male, age 80, right hemisphere 2.2
2487 Female, age 94, left hemisphere 2.1
1998 Female, age 91, both hemispheres 1.6
Putamen
nTPM: 6.8
2489 Female, age 72, unknown 12.9
2647 Male, age 75, left hemisphere 11.6
1829 Male, age 74, unknown 8.2
1838 Male, age 80, right hemisphere 5.7
2482 Female, age 94, left hemisphere 4.7
2466 Female, age 79, unknown 3.9
1937 Female, age 91, right hemisphere 0.9
Septal nuclei
nTPM: 5.2
2629 Female, age 94, right hemisphere 10.3
2199 Male, age 80, right hemisphere 9.3
2394 Male, age 61, left hemisphere 8.5
2059 Female, age 85, both hemispheres 7.7
2009 Female, age 91, both hemispheres 1.0
1960 Male, age 74, unknown 0.0
2031 Female, age 72, unknown 0.0

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 10.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 10.1
Samples: 246

Max nTPM: 16.6
Min nTPM: 3.4
Std nTPM: 2.4
Median nTPM: 10.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 16.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 16.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 16.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 16.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 15.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 15.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 15.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 15.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 14.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 14.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 14.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 9.3
Samples: 246

Max nTPM: 18.3
Min nTPM: 3.7
Std nTPM: 2.3
Median nTPM: 9.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 18.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 16.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 16.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 15.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 15.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 15.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 14.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 14.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 14.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 14.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 14.0
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Brain - Putamen (basal ganglia)
Average nTPM: 10.1
Samples: 205

Max nTPM: 17.0
Min nTPM: 5.4
Std nTPM: 2.4
Median nTPM: 9.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 17.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 16.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 16.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 16.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 15.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 15.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 14.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 14.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 14.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 14.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 14.2
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 85.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 56.5
FF:10164-103B2 76 years, female 56.5
Globus pallidus
Scaled Tags Per Million: 85.2
FF:10161-103A8 76 years, female 98.6
FF:10175-103C4 60 years, female 71.8
Nucleus accumbens
Scaled Tags Per Million: 62.9
FF:10037-101F1 23-56 years, mixed 62.9
Putamen
Scaled Tags Per Million: 47.6
FF:10176-103C5 60 years, female 47.6

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 16.1
Pig sample Sample description nTPM
Caudate
nTPM: 13.6
Samples: 4

Max nTPM: 15.0
Min nTPM: 11.7
Sample A Female 11.7
Sample B Female 13.6
Sample C Male 15.0
Sample D Male 13.9
Putamen
nTPM: 15.5
Samples: 4

Max nTPM: 17.6
Min nTPM: 13.5
Sample A Female 15.8
Sample B Female 13.5
Sample C Male 15.2
Sample D Male 17.6
Septum
nTPM: 15.1
Samples: 4

Max nTPM: 17.1
Min nTPM: 13.2
Sample A Female 13.2
Sample B Female 14.6
Sample C Male 15.4
Sample D Male 17.1
Ventral pallidum
nTPM: 16.1
Samples: 4

Max nTPM: 20.9
Min nTPM: 12.4
Sample A Female 12.4
Sample B Female 14.2
Sample C Male 20.9
Sample D Male 16.9

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 11.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 9.9
Samples: 4

Max nTPM: 10.4
Min nTPM: 9.1
Sample A Male 10.0
Sample B Male 10.0
Sample C Female 10.4
Sample D Female 9.1
Septum
nTPM: 10.3
Samples: 4

Max nTPM: 11.1
Min nTPM: 9.2
Sample A Male 10.7
Sample B Male 10.1
Sample C Female 9.2
Sample D Female 11.1
Ventral forebrain
nTPM: 11.5
Samples: 4

Max nTPM: 12.8
Min nTPM: 9.4
Sample A Male 12.4
Sample B Male 11.3
Sample C Female 9.4
Sample D Female 12.8

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 1.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.6
69288686 Antisense, RP_050407_01_E10, Mouse strain C57BL/6J (56 days, male) 1.6
Pallidum
Expression energy: 1.9
69288686 Antisense, RP_050407_01_E10, Mouse strain C57BL/6J (56 days, male) 1.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.