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PTPN23
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:7.1 nTPM
HPA:7.1 nTPM
GTEx:11.7 nTPM
FANTOM5:81.0 Scaled Tags Per Million
Pig:12.8 nTPM
Mouse:12.1 nTPM
Allen mouse:4.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA016845
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 7.1
Sample id Sample description nTPM
Hippocampus
nTPM: 5.0
2621 Female, age 67, right hemisphere 6.1
2529 Female, age 94, left hemisphere 5.6
1855 Male, age 76, left hemisphere 4.8
1898 Male, age 80, left hemisphere 4.6
1911 Female, age 85, right hemisphere 4.5
2148 Female, age 91, left hemisphere 4.5
Dentate gyrus
nTPM: 6.1
2530 Female, age 94, left hemisphere 8.8
2531 Female, age 67, both hemispheres 6.6
2528 Male, age 74, both hemispheres 6.4
2010 Male, age 76, both hemispheres 5.7
2246 Female, age 85, both hemispheres 4.8
1927 Female, age 91, both hemispheres 4.4
Entorhinal gyrus
nTPM: 7.1
2613 Female, age 94, left hemisphere 8.8
2764 Male, age 80, right hemisphere 8.6
2117 Female, age 91, right hemisphere 7.1
1787 Male, age 76, left hemisphere 6.3
2686 Male, age 75, right hemisphere 6.1
1938 Female, age 85, left hemisphere 5.7
Hippocampus, CA1
nTPM: 5.3
2749 Male, age 80, left hemisphere 6.4
2527 Male, age 74, both hemispheres 5.6
2045 Male, age 76, both hemispheres 5.5
1873 Female, age 85, both hemispheres 4.5
2082 Female, age 91, right hemisphere 4.5
Hippocampus, CA2
nTPM: 5.1
2437 Female, age 94, left hemisphere 6.6
1892 Male, age 76, both hemispheres 5.4
1940 Female, age 85, left hemisphere 5.0
1963 Male, age 80, left hemisphere 4.8
2249 Male, age 74, both hemispheres 4.7
2113 Female, age 91, right hemisphere 4.3
Hippocampus, CA3
nTPM: 6.1
2620 Female, age 94, left hemisphere 10.0
2137 Male, age 80, left hemisphere 5.9
1891 Female, age 85, both hemispheres 5.8
2861 Female, age 67, both hemispheres 5.8
2436 Male, age 74, both hemispheres 4.8
1867 Male, age 76, both hemispheres 4.0
Parahippocampal cortex
nTPM: 4.9
2018 Male, age 76, both hemispheres 5.9
2622 Female, age 67, right hemisphere 5.5
2692 Male, age 74, both hemispheres 5.5
1850 Male, age 80, both hemispheres 5.4
1990 Female, age 91, right hemisphere 4.9
2693 Female, age 94, both hemispheres 4.9
2245 Female, age 91, both hemispheres 4.8
2532 Female, age 72, left hemisphere 4.7
1933 Female, age 85, both hemispheres 3.7
2250 Female, age 67, right hemisphere 3.3
Perirhinal gyrus
nTPM: 4.3
1794 Male, age 80, right hemisphere 6.4
2848 Male, age 76, right hemisphere 4.9
1841 Female, age 85, right hemisphere 3.8
1847 Female, age 91, left hemisphere 3.8
2521 Female, age 94, right hemisphere 2.6
Subiculum
nTPM: 6.9
2619 Male, age 74, both hemispheres 9.7
2042 Male, age 76, both hemispheres 8.1
2438 Female, age 94, left hemisphere 7.0
1901 Male, age 80, both hemispheres 6.6
1977 Female, age 85, both hemispheres 5.9
2729 Female, age 91, right hemisphere 3.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.7
Samples: 197

Max nTPM: 27.9
Min nTPM: 0.0
Std nTPM: 3.8
Median nTPM: 11.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 27.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 20.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 20.2
GTEX-1I1GQ-0011-R1a-SM-CY8GG 50-59 years, male 20.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 19.9
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 19.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 19.1
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 19.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 18.4
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 18.2
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 18.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 81.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 81.0
FF:10169-103B7 60 years, female 91.0
FF:10153-102I9 76 years, female 71.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.1
Samples: 4

Max nTPM: 13.8
Min nTPM: 9.2
Sample A Female 13.8
Sample B Female 13.0
Sample C Male 12.5
Sample D Male 9.2
Entorhinal cortex
nTPM: 11.8
Samples: 4

Max nTPM: 12.9
Min nTPM: 10.5
Sample A Female 12.9
Sample B Female 10.5
Sample C Male 12.8
Sample D Male 11.0
Subiculum
nTPM: 12.5
Samples: 4

Max nTPM: 15.2
Min nTPM: 10.6
Sample A Female 15.2
Sample B Female 11.1
Sample C Male 13.2
Sample D Male 10.6
Ventral hippocampus
nTPM: 12.8
Samples: 4

Max nTPM: 16.4
Min nTPM: 9.9
Sample A Female 12.1
Sample B Female 9.9
Sample C Male 16.4
Sample D Male 12.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.1
Samples: 4

Max nTPM: 13.9
Min nTPM: 11.0
Sample A Male 11.9
Sample B Male 11.0
Sample C Female 11.4
Sample D Female 13.9
Hippocampal formation
nTPM: 11.9
Samples: 4

Max nTPM: 13.5
Min nTPM: 9.1
Sample A Male 9.1
Sample B Male 13.0
Sample C Female 11.9
Sample D Female 13.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.6
69817691 Antisense, RP_050510_03_E12, Mouse strain C57BL/6J (56 days, male) 4.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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