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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:29.2 nTPM
HPA:29.2 nTPM
GTEx:13.3 nTPM
FANTOM5:23.4 Scaled Tags Per Million
Pig:7.8 nTPM
Mouse:1.5 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB011605
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.2
Sample id Sample description nTPM
Hippocampus
nTPM: 28.6
2529 Female, age 94, left hemisphere 29.5
1898 Male, age 80, left hemisphere 29.4
2148 Female, age 91, left hemisphere 29.1
1911 Female, age 85, right hemisphere 28.3
1855 Male, age 76, left hemisphere 28.1
2621 Female, age 67, right hemisphere 27.2
Dentate gyrus
nTPM: 28.4
2528 Male, age 74, both hemispheres 30.9
2246 Female, age 85, both hemispheres 29.5
2010 Male, age 76, both hemispheres 28.7
2530 Female, age 94, left hemisphere 28.1
1927 Female, age 91, both hemispheres 27.4
2531 Female, age 67, both hemispheres 26.2
Entorhinal gyrus
nTPM: 28.3
2117 Female, age 91, right hemisphere 31.5
1938 Female, age 85, left hemisphere 29.1
2764 Male, age 80, right hemisphere 27.9
1787 Male, age 76, left hemisphere 27.7
2686 Male, age 75, right hemisphere 27.7
2613 Female, age 94, left hemisphere 25.9
Hippocampus, CA1
nTPM: 28.8
2527 Male, age 74, both hemispheres 32.2
2082 Female, age 91, right hemisphere 29.9
1873 Female, age 85, both hemispheres 28.6
2749 Male, age 80, left hemisphere 26.9
2045 Male, age 76, both hemispheres 26.4
Hippocampus, CA2
nTPM: 29.2
2249 Male, age 74, both hemispheres 32.3
2113 Female, age 91, right hemisphere 30.2
1940 Female, age 85, left hemisphere 29.5
1963 Male, age 80, left hemisphere 28.1
2437 Female, age 94, left hemisphere 27.8
1892 Male, age 76, both hemispheres 27.1
Hippocampus, CA3
nTPM: 28.2
2436 Male, age 74, both hemispheres 30.7
1891 Female, age 85, both hemispheres 29.3
2620 Female, age 94, left hemisphere 28.1
1867 Male, age 76, both hemispheres 27.9
2137 Male, age 80, left hemisphere 26.6
2861 Female, age 67, both hemispheres 26.6
Parahippocampal cortex
nTPM: 28.8
2692 Male, age 74, both hemispheres 30.1
2250 Female, age 67, right hemisphere 30.0
2622 Female, age 67, right hemisphere 29.6
1990 Female, age 91, right hemisphere 29.1
2018 Male, age 76, both hemispheres 29.0
1933 Female, age 85, both hemispheres 28.8
1850 Male, age 80, both hemispheres 28.6
2245 Female, age 91, both hemispheres 27.5
2532 Female, age 72, left hemisphere 27.5
2693 Female, age 94, both hemispheres 27.2
Perirhinal gyrus
nTPM: 29.0
1794 Male, age 80, right hemisphere 30.1
1847 Female, age 91, left hemisphere 29.9
1841 Female, age 85, right hemisphere 29.5
2521 Female, age 94, right hemisphere 28.2
2848 Male, age 76, right hemisphere 27.2
Subiculum
nTPM: 28.8
2619 Male, age 74, both hemispheres 32.1
2729 Female, age 91, right hemisphere 31.0
1977 Female, age 85, both hemispheres 29.1
1901 Male, age 80, both hemispheres 28.3
2042 Male, age 76, both hemispheres 28.0
2438 Female, age 94, left hemisphere 24.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.3
Samples: 197

Max nTPM: 25.5
Min nTPM: 4.3
Std nTPM: 4.5
Median nTPM: 12.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 25.5
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 24.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 24.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 24.0
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 23.9
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 22.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 22.4
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 22.3
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 22.3
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 22.2
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 22.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 23.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.4
FF:10153-102I9 76 years, female 30.0
FF:10169-103B7 60 years, female 16.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 7.8
Samples: 4

Max nTPM: 10.0
Min nTPM: 6.6
Sample A Female 10.0
Sample B Female 7.7
Sample C Male 6.9
Sample D Male 6.6
Entorhinal cortex
nTPM: 6.7
Samples: 4

Max nTPM: 7.2
Min nTPM: 5.7
Sample A Female 6.7
Sample B Female 7.0
Sample C Male 7.2
Sample D Male 5.7
Subiculum
nTPM: 7.1
Samples: 4

Max nTPM: 8.8
Min nTPM: 6.2
Sample A Female 8.8
Sample B Female 6.2
Sample C Male 6.6
Sample D Male 6.6
Ventral hippocampus
nTPM: 7.8
Samples: 4

Max nTPM: 9.2
Min nTPM: 6.5
Sample A Female 9.2
Sample B Female 6.5
Sample C Male 8.7
Sample D Male 6.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1.5
Samples: 4

Max nTPM: 2.1
Min nTPM: 0.9
Sample A Male 2.0
Sample B Male 2.1
Sample C Female 0.9
Sample D Female 0.9
Hippocampal formation
nTPM: 1.1
Samples: 4

Max nTPM: 1.2
Min nTPM: 1.0
Sample A Male 1.2
Sample B Male 1.2
Sample C Female 1.0
Sample D Female 1.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
632508 Antisense, RP_040907_01_F05, Mouse strain C57BL/6J (56 days, male) 0.1

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