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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:34.4 nTPM
HPA:34.4 nTPM
GTEx:30.1 nTPM
FANTOM5:44.0 Scaled Tags Per Million
Pig:27.0 nTPM
Mouse:59.5 nTPM
Allen mouse:13.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.4
Sample id Sample description nTPM
Hippocampus
nTPM: 31.4
1898 Male, age 80, left hemisphere 35.0
1855 Male, age 76, left hemisphere 32.2
2148 Female, age 91, left hemisphere 31.5
2621 Female, age 67, right hemisphere 30.7
2529 Female, age 94, left hemisphere 30.3
1911 Female, age 85, right hemisphere 28.8
Dentate gyrus
nTPM: 32.2
2010 Male, age 76, both hemispheres 35.3
1927 Female, age 91, both hemispheres 34.3
2246 Female, age 85, both hemispheres 32.2
2528 Male, age 74, both hemispheres 32.1
2530 Female, age 94, left hemisphere 30.0
2531 Female, age 67, both hemispheres 29.4
Entorhinal gyrus
nTPM: 32.5
1938 Female, age 85, left hemisphere 34.3
1787 Male, age 76, left hemisphere 34.0
2764 Male, age 80, right hemisphere 33.4
2613 Female, age 94, left hemisphere 31.7
2686 Male, age 75, right hemisphere 31.3
2117 Female, age 91, right hemisphere 30.5
Hippocampus, CA1
nTPM: 33.2
2749 Male, age 80, left hemisphere 37.8
1873 Female, age 85, both hemispheres 34.5
2045 Male, age 76, both hemispheres 32.3
2527 Male, age 74, both hemispheres 32.2
2082 Female, age 91, right hemisphere 29.3
Hippocampus, CA2
nTPM: 32.5
1892 Male, age 76, both hemispheres 36.7
1963 Male, age 80, left hemisphere 36.7
2249 Male, age 74, both hemispheres 31.7
1940 Female, age 85, left hemisphere 30.6
2113 Female, age 91, right hemisphere 30.0
2437 Female, age 94, left hemisphere 29.2
Hippocampus, CA3
nTPM: 31.7
2137 Male, age 80, left hemisphere 34.2
1867 Male, age 76, both hemispheres 33.5
1891 Female, age 85, both hemispheres 32.2
2436 Male, age 74, both hemispheres 31.8
2620 Female, age 94, left hemisphere 30.8
2861 Female, age 67, both hemispheres 27.6
Parahippocampal cortex
nTPM: 32.5
1850 Male, age 80, both hemispheres 36.3
1990 Female, age 91, right hemisphere 34.2
1933 Female, age 85, both hemispheres 34.0
2532 Female, age 72, left hemisphere 33.7
2692 Male, age 74, both hemispheres 32.1
2245 Female, age 91, both hemispheres 31.9
2250 Female, age 67, right hemisphere 31.6
2693 Female, age 94, both hemispheres 31.1
2018 Male, age 76, both hemispheres 30.8
2622 Female, age 67, right hemisphere 29.1
Perirhinal gyrus
nTPM: 34.4
1847 Female, age 91, left hemisphere 36.6
1841 Female, age 85, right hemisphere 36.3
1794 Male, age 80, right hemisphere 34.2
2521 Female, age 94, right hemisphere 33.2
2848 Male, age 76, right hemisphere 31.8
Subiculum
nTPM: 31.4
1977 Female, age 85, both hemispheres 33.3
1901 Male, age 80, both hemispheres 32.7
2438 Female, age 94, left hemisphere 31.7
2619 Male, age 74, both hemispheres 31.3
2729 Female, age 91, right hemisphere 30.3
2042 Male, age 76, both hemispheres 29.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.1
Samples: 197

Max nTPM: 48.3
Min nTPM: 15.3
Std nTPM: 5.3
Median nTPM: 29.7
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 48.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 46.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 46.0
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 45.9
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 44.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 43.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 41.9
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 40.5
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 40.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 39.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 38.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 44.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 44.0
FF:10153-102I9 76 years, female 55.5
FF:10169-103B7 60 years, female 32.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 25.7
Samples: 4

Max nTPM: 28.6
Min nTPM: 21.9
Sample A Female 28.6
Sample B Female 23.6
Sample C Male 28.6
Sample D Male 21.9
Entorhinal cortex
nTPM: 27.0
Samples: 4

Max nTPM: 30.0
Min nTPM: 25.7
Sample A Female 26.4
Sample B Female 30.0
Sample C Male 25.7
Sample D Male 26.0
Subiculum
nTPM: 23.9
Samples: 4

Max nTPM: 27.3
Min nTPM: 21.6
Sample A Female 27.3
Sample B Female 22.7
Sample C Male 21.6
Sample D Male 23.8
Ventral hippocampus
nTPM: 23.3
Samples: 4

Max nTPM: 25.1
Min nTPM: 21.6
Sample A Female 25.1
Sample B Female 21.6
Sample C Male 22.9
Sample D Male 23.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 59.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 59.5
Samples: 4

Max nTPM: 61.4
Min nTPM: 57.5
Sample A Male 59.7
Sample B Male 59.5
Sample C Female 57.5
Sample D Female 61.4
Hippocampal formation
nTPM: 59.0
Samples: 4

Max nTPM: 61.2
Min nTPM: 57.1
Sample A Male 57.1
Sample B Male 61.2
Sample C Female 60.1
Sample D Female 57.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.4
67765720 Antisense, RP_040916_01_F04, Mouse strain C57BL/6J (56 days, male) 13.4

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The Human Protein Atlas

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