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BRINP1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:35.7 nTPM
HPA:35.7 nTPM
GTEx:28.5 nTPM
FANTOM5:53.2 Scaled Tags Per Million
Pig:45.6 nTPM
Mouse:145.4 nTPM
Allen mouse:15.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038828
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.7
Sample id Sample description nTPM
Hippocampus
nTPM: 32.1
1898 Male, age 80, left hemisphere 41.9
2148 Female, age 91, left hemisphere 39.6
1855 Male, age 76, left hemisphere 36.7
2621 Female, age 67, right hemisphere 27.8
2529 Female, age 94, left hemisphere 23.5
1911 Female, age 85, right hemisphere 23.2
Dentate gyrus
nTPM: 32.1
1927 Female, age 91, both hemispheres 40.2
2528 Male, age 74, both hemispheres 35.1
2531 Female, age 67, both hemispheres 32.0
2246 Female, age 85, both hemispheres 31.0
2010 Male, age 76, both hemispheres 30.0
2530 Female, age 94, left hemisphere 24.5
Entorhinal gyrus
nTPM: 24.7
1787 Male, age 76, left hemisphere 29.2
2117 Female, age 91, right hemisphere 25.5
2613 Female, age 94, left hemisphere 24.0
2686 Male, age 75, right hemisphere 23.4
2764 Male, age 80, right hemisphere 23.4
1938 Female, age 85, left hemisphere 22.7
Hippocampus, CA1
nTPM: 35.5
2749 Male, age 80, left hemisphere 51.2
1873 Female, age 85, both hemispheres 36.8
2045 Male, age 76, both hemispheres 36.5
2527 Male, age 74, both hemispheres 28.8
2082 Female, age 91, right hemisphere 24.3
Hippocampus, CA2
nTPM: 29.3
1892 Male, age 76, both hemispheres 44.9
1963 Male, age 80, left hemisphere 38.9
2437 Female, age 94, left hemisphere 27.7
2113 Female, age 91, right hemisphere 22.5
1940 Female, age 85, left hemisphere 22.4
2249 Male, age 74, both hemispheres 19.4
Hippocampus, CA3
nTPM: 35.7
2137 Male, age 80, left hemisphere 51.9
2620 Female, age 94, left hemisphere 45.0
2861 Female, age 67, both hemispheres 40.5
1867 Male, age 76, both hemispheres 31.7
1891 Female, age 85, both hemispheres 24.0
2436 Male, age 74, both hemispheres 21.1
Parahippocampal cortex
nTPM: 24.7
2245 Female, age 91, both hemispheres 29.9
2250 Female, age 67, right hemisphere 28.8
2693 Female, age 94, both hemispheres 27.2
1933 Female, age 85, both hemispheres 26.4
1850 Male, age 80, both hemispheres 25.0
2622 Female, age 67, right hemisphere 22.9
1990 Female, age 91, right hemisphere 22.8
2018 Male, age 76, both hemispheres 22.8
2692 Male, age 74, both hemispheres 21.9
2532 Female, age 72, left hemisphere 19.1
Perirhinal gyrus
nTPM: 31.2
2521 Female, age 94, right hemisphere 41.8
1847 Female, age 91, left hemisphere 39.7
1794 Male, age 80, right hemisphere 30.8
1841 Female, age 85, right hemisphere 23.2
2848 Male, age 76, right hemisphere 20.4
Subiculum
nTPM: 25.8
2729 Female, age 91, right hemisphere 33.5
1901 Male, age 80, both hemispheres 31.1
1977 Female, age 85, both hemispheres 26.5
2619 Male, age 74, both hemispheres 23.8
2438 Female, age 94, left hemisphere 22.8
2042 Male, age 76, both hemispheres 16.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.5
Samples: 197

Max nTPM: 86.7
Min nTPM: 3.3
Std nTPM: 14.9
Median nTPM: 26.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 86.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 81.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 74.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 72.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 70.4
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 59.7
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 57.4
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 57.1
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 54.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 54.2
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 53.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.2
FF:10153-102I9 76 years, female 54.2
FF:10169-103B7 60 years, female 52.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 38.6
Samples: 4

Max nTPM: 51.6
Min nTPM: 27.1
Sample A Female 51.6
Sample B Female 40.4
Sample C Male 35.2
Sample D Male 27.1
Entorhinal cortex
nTPM: 45.6
Samples: 4

Max nTPM: 51.8
Min nTPM: 36.1
Sample A Female 51.3
Sample B Female 51.8
Sample C Male 36.1
Sample D Male 43.3
Subiculum
nTPM: 32.9
Samples: 4

Max nTPM: 48.2
Min nTPM: 26.3
Sample A Female 48.2
Sample B Female 27.2
Sample C Male 29.8
Sample D Male 26.3
Ventral hippocampus
nTPM: 31.2
Samples: 4

Max nTPM: 45.2
Min nTPM: 20.2
Sample A Female 31.0
Sample B Female 20.2
Sample C Male 28.5
Sample D Male 45.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 145.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 123.9
Samples: 4

Max nTPM: 146.4
Min nTPM: 102.2
Sample A Male 132.1
Sample B Male 146.4
Sample C Female 102.2
Sample D Female 115.0
Hippocampal formation
nTPM: 145.4
Samples: 4

Max nTPM: 174.3
Min nTPM: 121.8
Sample A Male 133.7
Sample B Male 151.9
Sample C Female 174.3
Sample D Female 121.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.7
72109467 Antisense, RP_050712_04_G12, Mouse strain C57BL/6J (56 days, male) 17.6
69012753 Antisense, RP_050309_01_D08, Mouse strain C57BL/6J (56 days, male) 13.9
70918946 Antisense, RP_050712_04_G12, Mouse strain C57BL/6J (56 days, male) 12.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.