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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody CAB025264
Pigment epithelial cells
Not detected
Photoreceptor cells
High
Limiting membrane
Not detected
Outer plexiform layer
Not detected
Inner nuclear layer
Not detected
Inner plexiform layer
Not detected
Ganglion cells
Not detected
Nerve fiber layer
Not detected
RETINA - Extended tissue profilei
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA075240
Pigment epithelial cells
Not detected
Photoreceptor cells
High
Limiting membrane
Not detected
Outer plexiform layer
Not detected
Inner nuclear layer
Not detected
Inner plexiform layer
Not detected
Ganglion cells
Not detected
Nerve fiber layer
Medium
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 650.1
Min nTPM: 17.6
Std nTPM: 126.3
Median nTPM: 0.0
415_1
77 years, female
650.1
162_1
79 years, female
583.5
491_1
89 years, female
537.3
32_1
67 years, male
535.3
315_1
62 years, female
513.1
324_1
76 years, male
496.0
142_1
61 years, female
493.1
526_1
61 years, male
492.9
414_1
84 years, female
491.2
413_1
59 years, female
490.7
81_1
67 years, male
478.6
217_1
76 years, male
475.9
172_1
72 years, female
463.2
466_1
57 years, female
453.8
6_1
73 years, female
447.1
35_1
74 years, female
443.8
43_1
64 years, female
440.2
311_1
78 years, male
435.9
405_1
91 years, male
430.4
149_1
88 years, male
429.8
386_1
76 years, male
424.6
243_1
75 years, male
411.9
229_1
69 years, female
407.8
286_1
68 years, female
403.7
153_1
70 years, female
397.5
376_1
75 years, female
389.3
425_1
59 years, female
381.7
518_1
75 years, female
378.4
352_1
62 years, male
374.1
120_1
70 years, female
367.8
17_1
71 years, male
362.1
490_1
67 years, female
360.5
316_1
62 years, male
342.6
251_1
78 years, male
339.8
9_1
66 years, female
337.7
347_1
72 years, male
336.7
379_1
60 years, male
335.5
468_1
89 years, male
335.0
499_1
55 years, female
333.1
99_1
64 years, male
328.3
321_1
62 years, female
327.5
313_1
79 years, female
326.6
517_1
88 years, male
324.0
119_1
70 years, female
322.7
404_1
82 years, female
320.1
480_1
63 years, male
319.7
389_1
86 years, female
317.7
335_1
73 years, female
314.5
354_1
81 years, female
311.8
237_1
82 years, male
308.4
447_1
81 years, male
306.2
348_1
84 years, male
299.3
137_1
83 years, male
294.8
189_1
76 years, male
292.5
218_1
71 years, female
277.7
109_1
81 years, female
276.6
349_1
83 years, male
276.0
375_1
74 years, female
275.7
145_1
84 years, male
274.7
293_1
68 years, female
273.1
394_1
75 years, female
271.5
350_1
84 years, female
270.4
265_1
87 years, male
267.4
117_1
61 years, male
266.7
319_1
81 years, male
266.0
89_1
63 years, male
264.4
320_1
89 years, female
258.6
177_1
74 years, male
253.0
163_1
78 years, male
237.4
353_1
82 years, female
237.4
292_1
71 years, male
236.2
291_1
76 years, male
224.3
322_1
76 years, male
208.4
266_1
85 years, male
204.9
396_1
62 years, male
203.6
2_1
77 years, female
201.0
173_1
67 years, male
194.9
314_1
67 years, male
192.1
307_1
66 years, female
185.4
351_1
91 years, male
184.8
246_1
77 years, male
180.7
254_1
77 years, female
178.8
126_1
63 years, male
174.9
318_1
68 years, male
166.6
115_1
83 years, male
163.7
356_1
87 years, female
158.5
41_1
94 years, female
158.4
317_1
60 years, male
156.1
377_1
82 years, female
152.5
501_1
88 years, male
151.8
495_1
57 years, female
150.3
42_1
85 years, male
143.9
506_1
65 years, male
143.9
406_1
79 years, male
140.0
355_1
70 years, female
138.9
18_1
88 years, male
138.5
4_1
88 years, female
137.9
452_1
88 years, female
133.6
139_1
64 years, female
133.0
503_1
68 years, male
127.6
384_1
83 years, male
119.2
295_1
61 years, female
117.9
288_1
66 years, female
115.2
308_1
70 years, female
82.6
264_1
73 years, female
17.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.