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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:33.3 nTPM
HPA:33.3 nTPM
GTEx:27.9 nTPM
FANTOM5:1.8 Scaled Tags Per Million
Pig:2.9 nTPM
Mouse:0.1 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA048256
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.3
Sample id Sample description nTPM
Hippocampus
nTPM: 33.3
2529 Female, age 94, left hemisphere 37.0
2148 Female, age 91, left hemisphere 35.4
1911 Female, age 85, right hemisphere 34.5
2621 Female, age 67, right hemisphere 33.1
1855 Male, age 76, left hemisphere 31.5
1898 Male, age 80, left hemisphere 28.1
Dentate gyrus
nTPM: 30.9
2246 Female, age 85, both hemispheres 34.6
1927 Female, age 91, both hemispheres 32.0
2528 Male, age 74, both hemispheres 31.2
2530 Female, age 94, left hemisphere 29.6
2010 Male, age 76, both hemispheres 28.9
2531 Female, age 67, both hemispheres 28.8
Entorhinal gyrus
nTPM: 29.9
2686 Male, age 75, right hemisphere 35.7
2764 Male, age 80, right hemisphere 30.3
2117 Female, age 91, right hemisphere 30.1
1938 Female, age 85, left hemisphere 28.6
1787 Male, age 76, left hemisphere 28.3
2613 Female, age 94, left hemisphere 26.4
Hippocampus, CA1
nTPM: 32.3
2527 Male, age 74, both hemispheres 36.5
2082 Female, age 91, right hemisphere 35.8
1873 Female, age 85, both hemispheres 31.8
2749 Male, age 80, left hemisphere 29.7
2045 Male, age 76, both hemispheres 27.7
Hippocampus, CA2
nTPM: 33.0
2249 Male, age 74, both hemispheres 37.9
2113 Female, age 91, right hemisphere 35.8
1940 Female, age 85, left hemisphere 35.6
2437 Female, age 94, left hemisphere 31.1
1963 Male, age 80, left hemisphere 30.2
1892 Male, age 76, both hemispheres 27.2
Hippocampus, CA3
nTPM: 32.1
2436 Male, age 74, both hemispheres 39.1
2861 Female, age 67, both hemispheres 33.4
2620 Female, age 94, left hemisphere 31.1
2137 Male, age 80, left hemisphere 30.7
1891 Female, age 85, both hemispheres 29.7
1867 Male, age 76, both hemispheres 28.6
Parahippocampal cortex
nTPM: 32.0
2622 Female, age 67, right hemisphere 39.0
2692 Male, age 74, both hemispheres 38.5
2018 Male, age 76, both hemispheres 31.5
2245 Female, age 91, both hemispheres 31.0
1933 Female, age 85, both hemispheres 30.9
2532 Female, age 72, left hemisphere 30.9
2693 Female, age 94, both hemispheres 30.2
1990 Female, age 91, right hemisphere 29.4
2250 Female, age 67, right hemisphere 29.4
1850 Male, age 80, both hemispheres 28.8
Perirhinal gyrus
nTPM: 29.4
1841 Female, age 85, right hemisphere 31.2
1794 Male, age 80, right hemisphere 30.1
2848 Male, age 76, right hemisphere 29.8
2521 Female, age 94, right hemisphere 28.6
1847 Female, age 91, left hemisphere 27.3
Subiculum
nTPM: 30.9
2729 Female, age 91, right hemisphere 33.3
2619 Male, age 74, both hemispheres 32.9
2438 Female, age 94, left hemisphere 32.7
2042 Male, age 76, both hemispheres 29.5
1977 Female, age 85, both hemispheres 28.5
1901 Male, age 80, both hemispheres 28.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.9
Samples: 197

Max nTPM: 116.1
Min nTPM: 4.6
Std nTPM: 16.5
Median nTPM: 25.0
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 116.1
GTEX-15CHQ-0011-R1a-SM-COH27 60-69 years, male 78.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 77.3
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 69.6
GTEX-1I1GQ-0011-R1a-SM-CY8GG 50-59 years, male 69.0
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 65.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 65.0
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 64.1
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 60.7
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 60.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 58.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1.8
FF:10153-102I9 76 years, female 2.5
FF:10169-103B7 60 years, female 1.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 2.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 2.9
Samples: 4

Max nTPM: 4.1
Min nTPM: 1.2
Sample A Female 4.1
Sample B Female 2.9
Sample C Male 3.5
Sample D Male 1.2
Entorhinal cortex
nTPM: 1.5
Samples: 4

Max nTPM: 2.1
Min nTPM: 0.9
Sample A Female 1.3
Sample B Female 2.1
Sample C Male 0.9
Sample D Male 1.6
Subiculum
nTPM: 1.8
Samples: 4

Max nTPM: 2.3
Min nTPM: 1.4
Sample A Female 1.8
Sample B Female 2.3
Sample C Male 1.4
Sample D Male 1.5
Ventral hippocampus
nTPM: 2.8
Samples: 4

Max nTPM: 3.3
Min nTPM: 2.4
Sample A Female 3.3
Sample B Female 2.4
Sample C Male 2.5
Sample D Male 2.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.1
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Male 0.1
Sample B Male 0.1
Sample C Female 0.1
Sample D Female 0.0
Hippocampal formation
nTPM: 0.1
Samples: 4

Max nTPM: 0.2
Min nTPM: 0.1
Sample A Male 0.1
Sample B Male 0.1
Sample C Female 0.1
Sample D Female 0.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
74272917 Antisense, RP_050915_04_C07, Mouse strain C57BL/6J (56 days, male) 0.9
71579942 Antisense, RP_050915_04_C07, Mouse strain C57BL/6J (56 days, male) 0.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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