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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:47.4 nTPM
HPA:47.4 nTPM
GTEx:37.3 nTPM
FANTOM5:61.3 Scaled Tags Per Million
Pig:22.2 nTPM
Mouse:43.0 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030760Antibody CAB006844
Glial cells LowNot detected
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 47.4
Sample id Sample description nTPM
Hippocampus
nTPM: 39.0
2529 Female, age 94, left hemisphere 45.5
1911 Female, age 85, right hemisphere 45.4
1855 Male, age 76, left hemisphere 37.3
2148 Female, age 91, left hemisphere 36.3
2621 Female, age 67, right hemisphere 35.2
1898 Male, age 80, left hemisphere 34.3
Dentate gyrus
nTPM: 40.8
2530 Female, age 94, left hemisphere 48.1
2010 Male, age 76, both hemispheres 43.8
2528 Male, age 74, both hemispheres 42.5
2246 Female, age 85, both hemispheres 38.8
2531 Female, age 67, both hemispheres 38.4
1927 Female, age 91, both hemispheres 33.4
Entorhinal gyrus
nTPM: 39.3
2117 Female, age 91, right hemisphere 48.9
2764 Male, age 80, right hemisphere 40.9
2686 Male, age 75, right hemisphere 38.9
1787 Male, age 76, left hemisphere 37.1
1938 Female, age 85, left hemisphere 35.1
2613 Female, age 94, left hemisphere 34.8
Hippocampus, CA1
nTPM: 37.9
2082 Female, age 91, right hemisphere 39.3
2527 Male, age 74, both hemispheres 39.2
2045 Male, age 76, both hemispheres 39.0
1873 Female, age 85, both hemispheres 37.5
2749 Male, age 80, left hemisphere 34.3
Hippocampus, CA2
nTPM: 39.0
1963 Male, age 80, left hemisphere 43.4
2113 Female, age 91, right hemisphere 41.5
2249 Male, age 74, both hemispheres 40.1
2437 Female, age 94, left hemisphere 39.3
1940 Female, age 85, left hemisphere 36.1
1892 Male, age 76, both hemispheres 34.0
Hippocampus, CA3
nTPM: 36.3
1891 Female, age 85, both hemispheres 48.6
1867 Male, age 76, both hemispheres 39.0
2436 Male, age 74, both hemispheres 35.8
2620 Female, age 94, left hemisphere 32.7
2137 Male, age 80, left hemisphere 32.2
2861 Female, age 67, both hemispheres 29.2
Parahippocampal cortex
nTPM: 36.8
2532 Female, age 72, left hemisphere 43.6
2692 Male, age 74, both hemispheres 42.7
2018 Male, age 76, both hemispheres 42.2
1990 Female, age 91, right hemisphere 40.2
1850 Male, age 80, both hemispheres 36.7
2245 Female, age 91, both hemispheres 36.6
1933 Female, age 85, both hemispheres 35.8
2693 Female, age 94, both hemispheres 32.1
2250 Female, age 67, right hemisphere 31.0
2622 Female, age 67, right hemisphere 26.6
Perirhinal gyrus
nTPM: 32.9
2848 Male, age 76, right hemisphere 37.6
2521 Female, age 94, right hemisphere 33.2
1794 Male, age 80, right hemisphere 32.8
1847 Female, age 91, left hemisphere 30.6
1841 Female, age 85, right hemisphere 30.5
Subiculum
nTPM: 47.4
2042 Male, age 76, both hemispheres 56.9
2438 Female, age 94, left hemisphere 51.7
1901 Male, age 80, both hemispheres 48.7
1977 Female, age 85, both hemispheres 45.0
2619 Male, age 74, both hemispheres 42.3
2729 Female, age 91, right hemisphere 40.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 37.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 37.3
Samples: 197

Max nTPM: 107.1
Min nTPM: 11.7
Std nTPM: 17.0
Median nTPM: 32.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 107.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 90.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 81.9
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 80.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 78.5
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 76.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 73.5
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 72.8
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 72.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 70.8
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 68.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 61.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 61.3
FF:10153-102I9 76 years, female 74.5
FF:10169-103B7 60 years, female 48.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.1
Samples: 4

Max nTPM: 29.5
Min nTPM: 16.7
Sample A Female 29.5
Sample B Female 19.5
Sample C Male 22.8
Sample D Male 16.7
Entorhinal cortex
nTPM: 18.9
Samples: 4

Max nTPM: 21.2
Min nTPM: 15.9
Sample A Female 20.0
Sample B Female 21.2
Sample C Male 18.3
Sample D Male 15.9
Subiculum
nTPM: 18.6
Samples: 4

Max nTPM: 21.7
Min nTPM: 16.1
Sample A Female 21.7
Sample B Female 17.4
Sample C Male 16.1
Sample D Male 19.3
Ventral hippocampus
nTPM: 19.6
Samples: 4

Max nTPM: 22.2
Min nTPM: 16.7
Sample A Female 22.2
Sample B Female 16.7
Sample C Male 19.5
Sample D Male 20.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 43.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 37.8
Samples: 4

Max nTPM: 42.5
Min nTPM: 35.9
Sample A Male 36.4
Sample B Male 36.5
Sample C Female 35.9
Sample D Female 42.5
Hippocampal formation
nTPM: 43.1
Samples: 4

Max nTPM: 50.1
Min nTPM: 34.5
Sample A Male 34.5
Sample B Male 46.4
Sample C Female 50.1
Sample D Female 41.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
79760446 Antisense, RP_071204_02_F01, Mouse strain C57BL/6J (56 days, male) 0.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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