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HSPB11
BASAL GANGLIA - Expression summary
Protein expression
Caudatei
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:37.1 nTPM
HPA:37.1 nTPM
GTEx:20.5 nTPM
FANTOM5:16.2 Scaled Tags Per Million
Pig:18.5 nTPM
Mouse:34.3 nTPM
Allen mouse:0.0 Expression energy

CAUDATE - Antibody stainingi
Antibody HPA030140
Glial cells Not detected
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 37.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 35.0
1857 Female, age 85, left hemisphere 37.0
1854 Male, age 80, left hemisphere 36.3
2290 Female, age 72, unknown 35.7
2846 Female, age 79, unknown 35.4
2288 Male, age 75, left hemisphere 35.0
1781 Male, age 74, unknown 34.2
2481 Female, age 94, left hemisphere 33.4
2289 Male, age 61, right hemisphere 32.9
Claustrum
nTPM: 34.4
2392 Female, age 94, both hemispheres 36.4
1956 Male, age 74, unknown 35.8
2196 Female, age 79, unknown 34.9
2491 Male, age 75, both hemispheres 34.8
2198 Male, age 80, both hemispheres 34.4
2284 Female, age 91, both hemispheres 34.2
2568 Male, age 61, both hemispheres 33.7
2292 Female, age 85, both hemispheres 32.7
2645 Female, age 72, unknown 32.6
Globus pallidus, externus
nTPM: 33.6
2395 Male, age 75, both hemispheres 35.3
2772 Female, age 79, unknown 35.1
1996 Male, age 80, right hemisphere 34.1
2567 Female, age 72, unknown 32.1
2646 Male, age 61, right hemisphere 31.7
Globus pallidus, internus
nTPM: 35.0
2287 Male, age 75, right hemisphere 36.6
2778 Female, age 91, both hemispheres 36.4
2037 Male, age 80, right hemisphere 35.7
1818 Male, age 74, unknown 35.2
2111 Female, age 85, right hemisphere 35.0
2566 Female, age 72, unknown 33.2
2483 Female, age 94, right hemisphere 33.1
Nucleus accumbens
nTPM: 35.5
1856 Female, age 91, right hemisphere 37.5
2286 Male, age 75, left hemisphere 36.1
2698 Female, age 72, unknown 35.7
2824 Male, age 61, right hemisphere 35.7
1783 Male, age 74, unknown 35.6
1806 Female, age 85, left hemisphere 35.4
2391 Female, age 94, left hemisphere 34.5
2732 Male, age 80, right hemisphere 33.2
Nucleus basalis of Meynert
nTPM: 33.8
2393 Male, age 80, right hemisphere 35.3
2821 Male, age 75, both hemispheres 34.8
2484 Female, age 94, left hemisphere 32.9
2569 Male, age 61, both hemispheres 32.3
Nucleus of the diagonal band
nTPM: 36.4
2029 Male, age 61, right hemisphere 39.7
2775 Male, age 80, right hemisphere 37.1
2195 Female, age 85, both hemispheres 35.9
1812 Female, age 91, both hemispheres 35.5
1979 Male, age 74, unknown 33.9
Olfactory tubercle
nTPM: 37.1
1998 Female, age 91, both hemispheres 38.5
1846 Male, age 80, right hemisphere 37.5
2487 Female, age 94, left hemisphere 37.2
2856 Male, age 75, right hemisphere 35.2
Putamen
nTPM: 34.7
1838 Male, age 80, right hemisphere 38.5
1937 Female, age 91, right hemisphere 36.5
2466 Female, age 79, unknown 34.8
2482 Female, age 94, left hemisphere 34.2
1829 Male, age 74, unknown 33.5
2647 Male, age 75, left hemisphere 33.1
2489 Female, age 72, unknown 32.0
Septal nuclei
nTPM: 34.9
2031 Female, age 72, unknown 37.3
1960 Male, age 74, unknown 36.5
2009 Female, age 91, both hemispheres 35.2
2629 Female, age 94, right hemisphere 35.1
2059 Female, age 85, both hemispheres 33.9
2199 Male, age 80, right hemisphere 33.6
2394 Male, age 61, left hemisphere 32.9

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 20.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 19.2
Samples: 246

Max nTPM: 38.9
Min nTPM: 11.2
Std nTPM: 4.4
Median nTPM: 18.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 38.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 38.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 38.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 34.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 33.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 32.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 30.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 30.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 29.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 29.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 28.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 20.5
Samples: 246

Max nTPM: 36.6
Min nTPM: 12.7
Std nTPM: 3.8
Median nTPM: 20.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 36.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 35.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 34.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 34.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 29.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 29.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 28.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 28.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 28.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 28.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 28.0
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Brain - Putamen (basal ganglia)
Average nTPM: 19.6
Samples: 205

Max nTPM: 41.6
Min nTPM: 11.3
Std nTPM: 4.2
Median nTPM: 19.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 41.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 36.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 33.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 30.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 28.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 28.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 28.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 27.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 27.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 27.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 27.2
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 14.4
FF:10164-103B2 76 years, female 14.4
Globus pallidus
Scaled Tags Per Million: 13.1
FF:10175-103C4 60 years, female 16.5
FF:10161-103A8 76 years, female 9.7
Nucleus accumbens
Scaled Tags Per Million: 12.5
FF:10037-101F1 23-56 years, mixed 12.5
Putamen
Scaled Tags Per Million: 16.2
FF:10176-103C5 60 years, female 16.2

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 18.5
Pig sample Sample description nTPM
Caudate
nTPM: 15.3
Samples: 4

Max nTPM: 17.0
Min nTPM: 14.2
Sample A Female 17.0
Sample B Female 15.7
Sample C Male 14.2
Sample D Male 14.3
Putamen
nTPM: 17.4
Samples: 4

Max nTPM: 19.0
Min nTPM: 15.5
Sample A Female 19.0
Sample B Female 15.5
Sample C Male 16.3
Sample D Male 18.8
Septum
nTPM: 18.5
Samples: 4

Max nTPM: 21.7
Min nTPM: 15.5
Sample A Female 19.9
Sample B Female 16.9
Sample C Male 15.5
Sample D Male 21.7
Ventral pallidum
nTPM: 16.0
Samples: 4

Max nTPM: 17.2
Min nTPM: 14.1
Sample A Female 16.3
Sample B Female 17.2
Sample C Male 14.1
Sample D Male 16.4

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 34.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 31.3
Samples: 4

Max nTPM: 34.0
Min nTPM: 28.2
Sample A Male 30.4
Sample B Male 34.0
Sample C Female 32.5
Sample D Female 28.2
Septum
nTPM: 34.3
Samples: 4

Max nTPM: 40.1
Min nTPM: 28.3
Sample A Male 28.3
Sample B Male 40.1
Sample C Female 37.0
Sample D Female 31.8
Ventral forebrain
nTPM: 30.8
Samples: 4

Max nTPM: 37.1
Min nTPM: 26.5
Sample A Male 29.4
Sample B Male 26.5
Sample C Female 37.1
Sample D Female 30.0

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.0
70609244 Antisense, RP_050414_01_E03, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.0
70609244 Antisense, RP_050414_01_E03, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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