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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:33.9 nTPM
HPA:33.9 nTPM
GTEx:37.4 nTPM
FANTOM5:134.4 Scaled Tags Per Million
Pig:142.9 nTPM
Mouse:131.1 nTPM
Allen mouse:11.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA053272
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.9
Sample id Sample description nTPM
Hippocampus
nTPM: 28.4
1898 Male, age 80, left hemisphere 36.6
1911 Female, age 85, right hemisphere 29.7
1855 Male, age 76, left hemisphere 28.0
2529 Female, age 94, left hemisphere 27.3
2621 Female, age 67, right hemisphere 26.9
2148 Female, age 91, left hemisphere 21.7
Dentate gyrus
nTPM: 29.5
2010 Male, age 76, both hemispheres 36.5
1927 Female, age 91, both hemispheres 32.9
2528 Male, age 74, both hemispheres 31.9
2530 Female, age 94, left hemisphere 28.8
2246 Female, age 85, both hemispheres 26.7
2531 Female, age 67, both hemispheres 20.4
Entorhinal gyrus
nTPM: 25.3
1938 Female, age 85, left hemisphere 32.5
2117 Female, age 91, right hemisphere 30.8
1787 Male, age 76, left hemisphere 26.1
2764 Male, age 80, right hemisphere 23.1
2613 Female, age 94, left hemisphere 20.7
2686 Male, age 75, right hemisphere 18.3
Hippocampus, CA1
nTPM: 33.9
2749 Male, age 80, left hemisphere 46.9
1873 Female, age 85, both hemispheres 34.5
2527 Male, age 74, both hemispheres 32.2
2045 Male, age 76, both hemispheres 30.6
2082 Female, age 91, right hemisphere 25.1
Hippocampus, CA2
nTPM: 31.0
2249 Male, age 74, both hemispheres 37.6
1892 Male, age 76, both hemispheres 35.4
1963 Male, age 80, left hemisphere 34.8
1940 Female, age 85, left hemisphere 29.3
2113 Female, age 91, right hemisphere 24.7
2437 Female, age 94, left hemisphere 24.0
Hippocampus, CA3
nTPM: 29.7
2137 Male, age 80, left hemisphere 37.5
1867 Male, age 76, both hemispheres 36.8
2436 Male, age 74, both hemispheres 33.7
1891 Female, age 85, both hemispheres 29.3
2620 Female, age 94, left hemisphere 21.9
2861 Female, age 67, both hemispheres 19.1
Parahippocampal cortex
nTPM: 26.5
1850 Male, age 80, both hemispheres 32.4
2250 Female, age 67, right hemisphere 30.1
1933 Female, age 85, both hemispheres 29.8
2018 Male, age 76, both hemispheres 28.9
1990 Female, age 91, right hemisphere 28.8
2532 Female, age 72, left hemisphere 26.0
2245 Female, age 91, both hemispheres 25.4
2692 Male, age 74, both hemispheres 24.2
2693 Female, age 94, both hemispheres 22.4
2622 Female, age 67, right hemisphere 17.2
Perirhinal gyrus
nTPM: 28.2
1841 Female, age 85, right hemisphere 31.9
1847 Female, age 91, left hemisphere 31.4
1794 Male, age 80, right hemisphere 27.7
2521 Female, age 94, right hemisphere 27.0
2848 Male, age 76, right hemisphere 22.9
Subiculum
nTPM: 28.2
2042 Male, age 76, both hemispheres 34.1
1901 Male, age 80, both hemispheres 31.6
1977 Female, age 85, both hemispheres 28.4
2729 Female, age 91, right hemisphere 27.7
2619 Male, age 74, both hemispheres 25.0
2438 Female, age 94, left hemisphere 22.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 37.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 37.4
Samples: 197

Max nTPM: 81.6
Min nTPM: 18.3
Std nTPM: 8.9
Median nTPM: 37.5
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 81.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 64.4
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 61.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 61.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 58.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 55.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 55.5
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 55.0
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 54.8
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 52.5
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 52.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 134.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 134.4
FF:10169-103B7 60 years, female 157.9
FF:10153-102I9 76 years, female 110.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 142.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 142.9
Samples: 4

Max nTPM: 194.0
Min nTPM: 103.7
Sample A Female 194.0
Sample B Female 129.0
Sample C Male 145.0
Sample D Male 103.7
Entorhinal cortex
nTPM: 115.4
Samples: 4

Max nTPM: 140.3
Min nTPM: 92.7
Sample A Female 112.1
Sample B Female 140.3
Sample C Male 116.6
Sample D Male 92.7
Subiculum
nTPM: 111.5
Samples: 4

Max nTPM: 140.6
Min nTPM: 97.0
Sample A Female 140.6
Sample B Female 100.6
Sample C Male 97.0
Sample D Male 107.6
Ventral hippocampus
nTPM: 117.5
Samples: 4

Max nTPM: 166.3
Min nTPM: 90.3
Sample A Female 166.3
Sample B Female 90.3
Sample C Male 98.5
Sample D Male 114.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 131.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 131.0
Samples: 4

Max nTPM: 137.0
Min nTPM: 124.7
Sample A Male 125.6
Sample B Male 136.8
Sample C Female 124.7
Sample D Female 137.0
Hippocampal formation
nTPM: 119.4
Samples: 4

Max nTPM: 130.6
Min nTPM: 111.8
Sample A Male 130.6
Sample B Male 112.8
Sample C Female 122.3
Sample D Female 111.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.3
293900 Antisense, RP_040617_01_E10, Mouse strain C57BL/6J (56 days, male) 11.3
324215 Antisense, RP_040617_01_E10, Mouse strain C57BL/6J (56 days, male) 10.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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