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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:14.9 nTPM
HPA:14.9 nTPM
GTEx:18.3 nTPM
FANTOM5:23.5 Scaled Tags Per Million
Pig:65.7 nTPM
Mouse:48.2 nTPM
Allen mouse:4.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB037021
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.9
Sample id Sample description nTPM
Hippocampus
nTPM: 12.3
1911 Female, age 85, right hemisphere 13.5
2529 Female, age 94, left hemisphere 12.8
1898 Male, age 80, left hemisphere 12.5
2621 Female, age 67, right hemisphere 12.3
2148 Female, age 91, left hemisphere 11.8
1855 Male, age 76, left hemisphere 10.6
Dentate gyrus
nTPM: 11.9
2530 Female, age 94, left hemisphere 14.7
2010 Male, age 76, both hemispheres 12.8
2528 Male, age 74, both hemispheres 11.5
2531 Female, age 67, both hemispheres 11.2
2246 Female, age 85, both hemispheres 10.9
1927 Female, age 91, both hemispheres 10.1
Entorhinal gyrus
nTPM: 14.9
2613 Female, age 94, left hemisphere 17.9
2764 Male, age 80, right hemisphere 15.7
1787 Male, age 76, left hemisphere 15.1
2117 Female, age 91, right hemisphere 14.1
1938 Female, age 85, left hemisphere 13.7
2686 Male, age 75, right hemisphere 12.6
Hippocampus, CA1
nTPM: 10.7
2749 Male, age 80, left hemisphere 12.7
1873 Female, age 85, both hemispheres 11.7
2527 Male, age 74, both hemispheres 11.0
2082 Female, age 91, right hemisphere 9.4
2045 Male, age 76, both hemispheres 8.9
Hippocampus, CA2
nTPM: 12.8
1963 Male, age 80, left hemisphere 17.3
1892 Male, age 76, both hemispheres 13.1
2437 Female, age 94, left hemisphere 13.0
1940 Female, age 85, left hemisphere 11.3
2249 Male, age 74, both hemispheres 11.2
2113 Female, age 91, right hemisphere 10.8
Hippocampus, CA3
nTPM: 9.9
1891 Female, age 85, both hemispheres 12.6
2861 Female, age 67, both hemispheres 11.3
2137 Male, age 80, left hemisphere 10.1
1867 Male, age 76, both hemispheres 9.5
2436 Male, age 74, both hemispheres 8.0
2620 Female, age 94, left hemisphere 7.9
Parahippocampal cortex
nTPM: 12.7
1850 Male, age 80, both hemispheres 14.3
2532 Female, age 72, left hemisphere 14.0
2692 Male, age 74, both hemispheres 13.7
2245 Female, age 91, both hemispheres 13.4
1990 Female, age 91, right hemisphere 12.9
2018 Male, age 76, both hemispheres 12.5
2622 Female, age 67, right hemisphere 12.0
2693 Female, age 94, both hemispheres 11.8
1933 Female, age 85, both hemispheres 11.7
2250 Female, age 67, right hemisphere 10.4
Perirhinal gyrus
nTPM: 14.4
1794 Male, age 80, right hemisphere 16.3
2848 Male, age 76, right hemisphere 14.8
2521 Female, age 94, right hemisphere 14.2
1847 Female, age 91, left hemisphere 14.0
1841 Female, age 85, right hemisphere 12.7
Subiculum
nTPM: 11.9
1977 Female, age 85, both hemispheres 14.3
2042 Male, age 76, both hemispheres 13.2
1901 Male, age 80, both hemispheres 12.4
2619 Male, age 74, both hemispheres 11.9
2729 Female, age 91, right hemisphere 10.3
2438 Female, age 94, left hemisphere 9.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.3
Samples: 197

Max nTPM: 36.5
Min nTPM: 7.0
Std nTPM: 4.5
Median nTPM: 17.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 36.5
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 33.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 29.6
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 29.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 29.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 28.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 28.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 28.1
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 27.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 27.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 26.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 23.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.5
FF:10153-102I9 76 years, female 27.1
FF:10169-103B7 60 years, female 19.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 65.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 42.4
Samples: 4

Max nTPM: 48.1
Min nTPM: 32.6
Sample A Female 48.1
Sample B Female 41.4
Sample C Male 47.3
Sample D Male 32.6
Entorhinal cortex
nTPM: 65.7
Samples: 4

Max nTPM: 82.3
Min nTPM: 59.3
Sample A Female 60.4
Sample B Female 60.8
Sample C Male 82.3
Sample D Male 59.3
Subiculum
nTPM: 48.1
Samples: 4

Max nTPM: 57.1
Min nTPM: 44.5
Sample A Female 57.1
Sample B Female 45.9
Sample C Male 44.7
Sample D Male 44.5
Ventral hippocampus
nTPM: 42.1
Samples: 4

Max nTPM: 55.2
Min nTPM: 34.9
Sample A Female 34.9
Sample B Female 35.7
Sample C Male 55.2
Sample D Male 42.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 48.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 48.2
Samples: 4

Max nTPM: 52.0
Min nTPM: 43.7
Sample A Male 49.8
Sample B Male 47.3
Sample C Female 43.7
Sample D Female 52.0
Hippocampal formation
nTPM: 44.6
Samples: 4

Max nTPM: 48.8
Min nTPM: 39.2
Sample A Male 42.7
Sample B Male 47.7
Sample C Female 48.8
Sample D Female 39.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.8
70194570 Antisense, RP_050517_01_F06, Mouse strain C57BL/6J (56 days, male) 4.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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