ABOUTMENU
HELP
NEWS
ZNF586
BASAL GANGLIA - Expression summary
Protein expression
Caudatei
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:4.0 nTPM
HPA:4.0 nTPM
GTEx:2.5 nTPM
FANTOM5:25.5 Scaled Tags Per Million

CAUDATE - Antibody stainingi
Antibody HPA060782
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 4.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 1.0
1854 Male, age 80, left hemisphere 3.1
2289 Male, age 61, right hemisphere 2.0
1781 Male, age 74, unknown 1.3
2290 Female, age 72, unknown 1.3
2846 Female, age 79, unknown 0.8
1857 Female, age 85, left hemisphere 0.0
2288 Male, age 75, left hemisphere 0.0
2481 Female, age 94, left hemisphere 0.0
Claustrum
nTPM: 4.0
2645 Female, age 72, unknown 9.5
2568 Male, age 61, both hemispheres 5.4
2284 Female, age 91, both hemispheres 5.1
2292 Female, age 85, both hemispheres 4.1
2392 Female, age 94, both hemispheres 3.6
2491 Male, age 75, both hemispheres 2.8
2198 Male, age 80, both hemispheres 2.3
1956 Male, age 74, unknown 2.1
2196 Female, age 79, unknown 1.2
Globus pallidus, externus
nTPM: 2.2
2567 Female, age 72, unknown 7.3
2646 Male, age 61, right hemisphere 4.0
1996 Male, age 80, right hemisphere 0.0
2395 Male, age 75, both hemispheres 0.0
2772 Female, age 79, unknown 0.0
Globus pallidus, internus
nTPM: 1.6
2566 Female, age 72, unknown 5.5
2111 Female, age 85, right hemisphere 4.1
1818 Male, age 74, unknown 1.2
2778 Female, age 91, both hemispheres 0.5
2037 Male, age 80, right hemisphere 0.2
2287 Male, age 75, right hemisphere 0.0
2483 Female, age 94, right hemisphere 0.0
Nucleus accumbens
nTPM: 1.3
2824 Male, age 61, right hemisphere 3.9
2732 Male, age 80, right hemisphere 2.8
2391 Female, age 94, left hemisphere 1.3
1783 Male, age 74, unknown 1.1
1856 Female, age 91, right hemisphere 1.1
2286 Male, age 75, left hemisphere 0.5
1806 Female, age 85, left hemisphere 0.0
2698 Female, age 72, unknown 0.0
Nucleus basalis of Meynert
nTPM: 2.2
2393 Male, age 80, right hemisphere 3.7
2569 Male, age 61, both hemispheres 3.5
2821 Male, age 75, both hemispheres 0.9
2484 Female, age 94, left hemisphere 0.7
Nucleus of the diagonal band
nTPM: 2.2
2195 Female, age 85, both hemispheres 3.1
1979 Male, age 74, unknown 2.9
2029 Male, age 61, right hemisphere 2.6
2775 Male, age 80, right hemisphere 2.3
1812 Female, age 91, both hemispheres 0.0
Olfactory tubercle
nTPM: 2.3
2487 Female, age 94, left hemisphere 3.1
1998 Female, age 91, both hemispheres 2.4
2856 Male, age 75, right hemisphere 2.1
1846 Male, age 80, right hemisphere 1.7
Putamen
nTPM: 2.6
2489 Female, age 72, unknown 6.7
2647 Male, age 75, left hemisphere 3.7
1838 Male, age 80, right hemisphere 2.7
2466 Female, age 79, unknown 2.6
1829 Male, age 74, unknown 1.6
1937 Female, age 91, right hemisphere 0.8
2482 Female, age 94, left hemisphere 0.0
Septal nuclei
nTPM: 2.0
2059 Female, age 85, both hemispheres 4.1
2199 Male, age 80, right hemisphere 3.6
2009 Female, age 91, both hemispheres 2.5
2394 Male, age 61, left hemisphere 1.9
1960 Male, age 74, unknown 1.2
2629 Female, age 94, right hemisphere 0.4
2031 Female, age 72, unknown 0.0

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 2.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 2.4
Samples: 246

Max nTPM: 4.6
Min nTPM: 0.8
Std nTPM: 0.6
Median nTPM: 2.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 4.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 4.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 4.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 4.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 4.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 4.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 4.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 4.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 3.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 3.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 3.7
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 2.5
Samples: 246

Max nTPM: 5.8
Min nTPM: 1.1
Std nTPM: 0.6
Median nTPM: 2.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 5.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 4.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 4.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 4.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 4.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 4.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 3.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 3.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 3.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 3.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 3.7
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 2.3
Samples: 205

Max nTPM: 5.1
Min nTPM: 0.9
Std nTPM: 0.6
Median nTPM: 2.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 5.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 4.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 4.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 3.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 3.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 3.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 3.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 3.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 3.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 3.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 3.4
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 25.5
FF:10164-103B2 76 years, female 25.5
Globus pallidus
Scaled Tags Per Million: 22.9
FF:10161-103A8 76 years, female 25.4
FF:10175-103C4 60 years, female 20.5
Nucleus accumbens
Scaled Tags Per Million: 16.0
FF:10037-101F1 23-56 years, mixed 16.0
Putamen
Scaled Tags Per Million: 22.3
FF:10176-103C5 60 years, female 22.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.