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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:108.8 nTPM
HPA:108.8 nTPM
GTEx:131.2 nTPM
FANTOM5:356.7 Scaled Tags Per Million
Pig:132.8 nTPM
Mouse:115.8 nTPM
Allen mouse:16.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA009263
Glial cells Low
Neuronal cells High


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 108.8
Sample id Sample description nTPM
Hippocampus
nTPM: 87.0
2621 Female, age 67, right hemisphere 103.1
1898 Male, age 80, left hemisphere 97.7
1855 Male, age 76, left hemisphere 94.2
2148 Female, age 91, left hemisphere 86.9
1911 Female, age 85, right hemisphere 73.8
2529 Female, age 94, left hemisphere 66.1
Dentate gyrus
nTPM: 93.5
1927 Female, age 91, both hemispheres 109.4
2530 Female, age 94, left hemisphere 100.4
2531 Female, age 67, both hemispheres 93.4
2010 Male, age 76, both hemispheres 90.7
2246 Female, age 85, both hemispheres 89.0
2528 Male, age 74, both hemispheres 78.3
Entorhinal gyrus
nTPM: 92.1
2613 Female, age 94, left hemisphere 117.2
2764 Male, age 80, right hemisphere 100.1
1938 Female, age 85, left hemisphere 94.2
1787 Male, age 76, left hemisphere 89.7
2686 Male, age 75, right hemisphere 82.4
2117 Female, age 91, right hemisphere 68.7
Hippocampus, CA1
nTPM: 99.0
2749 Male, age 80, left hemisphere 139.6
2045 Male, age 76, both hemispheres 98.6
1873 Female, age 85, both hemispheres 88.6
2082 Female, age 91, right hemisphere 87.1
2527 Male, age 74, both hemispheres 81.0
Hippocampus, CA2
nTPM: 87.9
1892 Male, age 76, both hemispheres 109.9
1963 Male, age 80, left hemisphere 92.8
2437 Female, age 94, left hemisphere 87.1
2113 Female, age 91, right hemisphere 79.9
1940 Female, age 85, left hemisphere 78.9
2249 Male, age 74, both hemispheres 78.9
Hippocampus, CA3
nTPM: 98.4
2137 Male, age 80, left hemisphere 120.6
2620 Female, age 94, left hemisphere 117.1
2861 Female, age 67, both hemispheres 99.1
1867 Male, age 76, both hemispheres 97.1
2436 Male, age 74, both hemispheres 80.6
1891 Female, age 85, both hemispheres 75.7
Parahippocampal cortex
nTPM: 92.9
1850 Male, age 80, both hemispheres 101.4
2245 Female, age 91, both hemispheres 101.1
2622 Female, age 67, right hemisphere 100.3
2693 Female, age 94, both hemispheres 98.5
2250 Female, age 67, right hemisphere 96.1
1933 Female, age 85, both hemispheres 90.6
1990 Female, age 91, right hemisphere 89.4
2532 Female, age 72, left hemisphere 89.0
2692 Male, age 74, both hemispheres 83.3
2018 Male, age 76, both hemispheres 79.2
Perirhinal gyrus
nTPM: 108.8
1847 Female, age 91, left hemisphere 121.9
1794 Male, age 80, right hemisphere 110.9
2521 Female, age 94, right hemisphere 109.7
1841 Female, age 85, right hemisphere 101.7
2848 Male, age 76, right hemisphere 99.8
Subiculum
nTPM: 80.5
1901 Male, age 80, both hemispheres 92.2
1977 Female, age 85, both hemispheres 87.4
2619 Male, age 74, both hemispheres 85.7
2438 Female, age 94, left hemisphere 76.3
2042 Male, age 76, both hemispheres 70.9
2729 Female, age 91, right hemisphere 70.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 131.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 131.2
Samples: 197

Max nTPM: 280.5
Min nTPM: 34.0
Std nTPM: 56.5
Median nTPM: 131.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 280.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 264.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 261.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 256.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 252.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 252.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 251.9
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 243.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 234.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 229.0
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 223.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 356.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 356.7
FF:10169-103B7 60 years, female 438.4
FF:10153-102I9 76 years, female 275.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 132.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 132.8
Samples: 4

Max nTPM: 162.5
Min nTPM: 108.4
Sample A Female 162.5
Sample B Female 138.5
Sample C Male 108.4
Sample D Male 121.9
Entorhinal cortex
nTPM: 124.7
Samples: 4

Max nTPM: 134.6
Min nTPM: 117.7
Sample A Female 134.6
Sample B Female 117.7
Sample C Male 122.6
Sample D Male 123.7
Subiculum
nTPM: 117.3
Samples: 4

Max nTPM: 157.8
Min nTPM: 95.0
Sample A Female 157.8
Sample B Female 98.1
Sample C Male 118.4
Sample D Male 95.0
Ventral hippocampus
nTPM: 131.4
Samples: 4

Max nTPM: 163.1
Min nTPM: 90.3
Sample A Female 118.8
Sample B Female 90.3
Sample C Male 163.1
Sample D Male 153.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 115.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 115.8
Samples: 4

Max nTPM: 131.3
Min nTPM: 103.9
Sample A Male 115.5
Sample B Male 112.5
Sample C Female 103.9
Sample D Female 131.3
Hippocampal formation
nTPM: 115.6
Samples: 4

Max nTPM: 119.1
Min nTPM: 108.2
Sample A Male 108.2
Sample B Male 119.1
Sample C Female 117.2
Sample D Female 117.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.7
69015218 Antisense, RP_050310_02_E07, Mouse strain C57BL/6J (56 days, male) 16.7

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