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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:13.0 nTPM
HPA:13.0 nTPM
GTEx:15.5 nTPM
FANTOM5:69.9 Scaled Tags Per Million
Pig:17.9 nTPM
Mouse:19.2 nTPM
Allen mouse:15.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.0
Sample id Sample description nTPM
Hippocampus
nTPM: 11.9
2621 Female, age 67, right hemisphere 14.5
2529 Female, age 94, left hemisphere 12.9
1855 Male, age 76, left hemisphere 12.3
2148 Female, age 91, left hemisphere 12.3
1898 Male, age 80, left hemisphere 10.0
1911 Female, age 85, right hemisphere 9.3
Dentate gyrus
nTPM: 11.4
2531 Female, age 67, both hemispheres 14.1
2530 Female, age 94, left hemisphere 13.0
2246 Female, age 85, both hemispheres 11.5
1927 Female, age 91, both hemispheres 10.6
2010 Male, age 76, both hemispheres 10.0
2528 Male, age 74, both hemispheres 9.0
Entorhinal gyrus
nTPM: 13.0
2613 Female, age 94, left hemisphere 16.1
1787 Male, age 76, left hemisphere 14.1
2764 Male, age 80, right hemisphere 14.0
2686 Male, age 75, right hemisphere 12.7
1938 Female, age 85, left hemisphere 11.9
2117 Female, age 91, right hemisphere 9.4
Hippocampus, CA1
nTPM: 11.5
2749 Male, age 80, left hemisphere 13.8
2045 Male, age 76, both hemispheres 11.8
2527 Male, age 74, both hemispheres 11.4
1873 Female, age 85, both hemispheres 10.7
2082 Female, age 91, right hemisphere 9.6
Hippocampus, CA2
nTPM: 9.7
2437 Female, age 94, left hemisphere 10.7
1963 Male, age 80, left hemisphere 9.8
1892 Male, age 76, both hemispheres 9.6
1940 Female, age 85, left hemisphere 9.6
2113 Female, age 91, right hemisphere 9.4
2249 Male, age 74, both hemispheres 8.8
Hippocampus, CA3
nTPM: 12.6
2620 Female, age 94, left hemisphere 18.3
2861 Female, age 67, both hemispheres 16.7
2137 Male, age 80, left hemisphere 12.5
2436 Male, age 74, both hemispheres 10.0
1867 Male, age 76, both hemispheres 9.3
1891 Female, age 85, both hemispheres 8.6
Parahippocampal cortex
nTPM: 12.0
2622 Female, age 67, right hemisphere 17.0
2245 Female, age 91, both hemispheres 14.5
2532 Female, age 72, left hemisphere 13.2
2693 Female, age 94, both hemispheres 11.7
2692 Male, age 74, both hemispheres 11.3
1850 Male, age 80, both hemispheres 11.1
1933 Female, age 85, both hemispheres 10.9
2018 Male, age 76, both hemispheres 10.5
2250 Female, age 67, right hemisphere 10.3
1990 Female, age 91, right hemisphere 9.9
Perirhinal gyrus
nTPM: 11.9
1794 Male, age 80, right hemisphere 13.5
2848 Male, age 76, right hemisphere 12.4
2521 Female, age 94, right hemisphere 11.8
1847 Female, age 91, left hemisphere 11.0
1841 Female, age 85, right hemisphere 10.9
Subiculum
nTPM: 10.4
2619 Male, age 74, both hemispheres 11.9
2438 Female, age 94, left hemisphere 10.7
1901 Male, age 80, both hemispheres 10.6
1977 Female, age 85, both hemispheres 10.4
2042 Male, age 76, both hemispheres 10.0
2729 Female, age 91, right hemisphere 8.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.5
Samples: 197

Max nTPM: 24.4
Min nTPM: 8.7
Std nTPM: 3.2
Median nTPM: 15.4
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 24.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 24.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 23.8
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 23.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 23.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 22.1
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 22.1
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 21.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 21.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 21.5
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 21.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 69.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 69.9
FF:10169-103B7 60 years, female 76.3
FF:10153-102I9 76 years, female 63.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.9
Samples: 4

Max nTPM: 21.1
Min nTPM: 15.3
Sample A Female 21.1
Sample B Female 18.5
Sample C Male 16.8
Sample D Male 15.3
Entorhinal cortex
nTPM: 16.6
Samples: 4

Max nTPM: 19.4
Min nTPM: 14.7
Sample A Female 19.4
Sample B Female 14.7
Sample C Male 16.8
Sample D Male 15.5
Subiculum
nTPM: 17.4
Samples: 4

Max nTPM: 23.4
Min nTPM: 13.9
Sample A Female 23.4
Sample B Female 15.8
Sample C Male 16.6
Sample D Male 13.9
Ventral hippocampus
nTPM: 17.4
Samples: 4

Max nTPM: 21.8
Min nTPM: 13.4
Sample A Female 16.7
Sample B Female 13.4
Sample C Male 21.8
Sample D Male 17.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.1
Samples: 4

Max nTPM: 19.7
Min nTPM: 17.1
Sample A Male 17.4
Sample B Male 18.2
Sample C Female 17.1
Sample D Female 19.7
Hippocampal formation
nTPM: 19.2
Samples: 4

Max nTPM: 21.1
Min nTPM: 16.5
Sample A Male 16.5
Sample B Male 21.1
Sample C Female 18.9
Sample D Female 20.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.2
69059949 Antisense, RP_050317_04_F09, Mouse strain C57BL/6J (56 days, male) 15.2

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