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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:15.1 nTPM
HPA:15.1 nTPM
GTEx:15.9 nTPM
FANTOM5:15.0 Scaled Tags Per Million
Pig:10.9 nTPM
Mouse:7.7 nTPM
Allen mouse:2.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037503Antibody HPA037504
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.1
Sample id Sample description nTPM
Hippocampus
nTPM: 14.9
1911 Female, age 85, right hemisphere 17.8
2621 Female, age 67, right hemisphere 16.6
1855 Male, age 76, left hemisphere 14.9
2148 Female, age 91, left hemisphere 14.3
1898 Male, age 80, left hemisphere 13.4
2529 Female, age 94, left hemisphere 12.6
Dentate gyrus
nTPM: 14.7
2531 Female, age 67, both hemispheres 18.4
1927 Female, age 91, both hemispheres 16.5
2246 Female, age 85, both hemispheres 15.6
2010 Male, age 76, both hemispheres 13.8
2530 Female, age 94, left hemisphere 12.6
2528 Male, age 74, both hemispheres 11.3
Entorhinal gyrus
nTPM: 15.1
2686 Male, age 75, right hemisphere 17.8
2613 Female, age 94, left hemisphere 15.5
1938 Female, age 85, left hemisphere 15.4
2117 Female, age 91, right hemisphere 15.2
1787 Male, age 76, left hemisphere 14.7
2764 Male, age 80, right hemisphere 12.3
Hippocampus, CA1
nTPM: 14.3
2045 Male, age 76, both hemispheres 17.4
2527 Male, age 74, both hemispheres 15.6
2082 Female, age 91, right hemisphere 13.6
1873 Female, age 85, both hemispheres 13.1
2749 Male, age 80, left hemisphere 11.9
Hippocampus, CA2
nTPM: 13.8
2437 Female, age 94, left hemisphere 15.3
2113 Female, age 91, right hemisphere 14.6
1940 Female, age 85, left hemisphere 14.2
1892 Male, age 76, both hemispheres 13.7
2249 Male, age 74, both hemispheres 12.8
1963 Male, age 80, left hemisphere 12.4
Hippocampus, CA3
nTPM: 15.1
2861 Female, age 67, both hemispheres 18.4
2620 Female, age 94, left hemisphere 16.4
2137 Male, age 80, left hemisphere 16.0
1867 Male, age 76, both hemispheres 14.8
1891 Female, age 85, both hemispheres 13.4
2436 Male, age 74, both hemispheres 11.7
Parahippocampal cortex
nTPM: 15.0
2692 Male, age 74, both hemispheres 17.9
1933 Female, age 85, both hemispheres 17.2
2018 Male, age 76, both hemispheres 16.9
2622 Female, age 67, right hemisphere 16.2
2532 Female, age 72, left hemisphere 15.4
2693 Female, age 94, both hemispheres 15.0
1990 Female, age 91, right hemisphere 13.7
2250 Female, age 67, right hemisphere 13.7
2245 Female, age 91, both hemispheres 12.2
1850 Male, age 80, both hemispheres 12.0
Perirhinal gyrus
nTPM: 14.8
1841 Female, age 85, right hemisphere 17.4
1847 Female, age 91, left hemisphere 14.9
2521 Female, age 94, right hemisphere 14.0
1794 Male, age 80, right hemisphere 13.9
2848 Male, age 76, right hemisphere 13.8
Subiculum
nTPM: 14.4
1901 Male, age 80, both hemispheres 15.9
2042 Male, age 76, both hemispheres 15.3
2729 Female, age 91, right hemisphere 15.2
2619 Male, age 74, both hemispheres 14.1
2438 Female, age 94, left hemisphere 13.7
1977 Female, age 85, both hemispheres 12.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.9
Samples: 197

Max nTPM: 38.2
Min nTPM: 7.3
Std nTPM: 3.5
Median nTPM: 15.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 38.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 27.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 25.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 24.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 24.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 24.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 23.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 22.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 22.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 21.5
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 21.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.0
FF:10153-102I9 76 years, female 17.6
FF:10169-103B7 60 years, female 12.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.6
Samples: 4

Max nTPM: 11.2
Min nTPM: 8.4
Sample A Female 10.4
Sample B Female 8.4
Sample C Male 11.2
Sample D Male 8.5
Entorhinal cortex
nTPM: 11.0
Samples: 4

Max nTPM: 14.1
Min nTPM: 9.1
Sample A Female 9.2
Sample B Female 14.1
Sample C Male 11.4
Sample D Male 9.1
Subiculum
nTPM: 10.1
Samples: 4

Max nTPM: 12.7
Min nTPM: 8.5
Sample A Female 12.7
Sample B Female 10.2
Sample C Male 8.5
Sample D Male 9.1
Ventral hippocampus
nTPM: 8.9
Samples: 4

Max nTPM: 9.5
Min nTPM: 8.5
Sample A Female 8.9
Sample B Female 9.5
Sample C Male 8.7
Sample D Male 8.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.9
Samples: 4

Max nTPM: 8.2
Min nTPM: 5.2
Sample A Male 6.7
Sample B Male 7.6
Sample C Female 8.2
Sample D Female 5.2
Hippocampal formation
nTPM: 7.7
Samples: 4

Max nTPM: 8.5
Min nTPM: 6.7
Sample A Male 8.5
Sample B Male 8.0
Sample C Female 6.7
Sample D Female 7.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.7
69873367 Antisense, RP_050512_01_B04, Mouse strain C57BL/6J (56 days, male) 2.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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