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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:99.2 nTPM
HPA:99.2 nTPM
GTEx:94.6 nTPM
FANTOM5:132.1 Scaled Tags Per Million
Pig:109.4 nTPM
Mouse:261.4 nTPM
Allen mouse:17.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035873Antibody HPA035874Antibody CAB009794
Glial cells MediumNot detectedLow
Neuronal cells LowNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 99.2
Sample id Sample description nTPM
Hippocampus
nTPM: 96.5
2529 Female, age 94, left hemisphere 114.9
2621 Female, age 67, right hemisphere 98.1
1855 Male, age 76, left hemisphere 96.0
1898 Male, age 80, left hemisphere 93.0
2148 Female, age 91, left hemisphere 92.4
1911 Female, age 85, right hemisphere 84.9
Dentate gyrus
nTPM: 87.1
2530 Female, age 94, left hemisphere 96.6
2531 Female, age 67, both hemispheres 92.6
2246 Female, age 85, both hemispheres 84.9
2010 Male, age 76, both hemispheres 84.8
1927 Female, age 91, both hemispheres 82.8
2528 Male, age 74, both hemispheres 81.0
Entorhinal gyrus
nTPM: 98.2
2117 Female, age 91, right hemisphere 104.8
2764 Male, age 80, right hemisphere 103.7
2613 Female, age 94, left hemisphere 99.1
1787 Male, age 76, left hemisphere 97.5
1938 Female, age 85, left hemisphere 95.7
2686 Male, age 75, right hemisphere 88.4
Hippocampus, CA1
nTPM: 91.4
2749 Male, age 80, left hemisphere 99.0
2527 Male, age 74, both hemispheres 97.4
2045 Male, age 76, both hemispheres 90.3
1873 Female, age 85, both hemispheres 89.3
2082 Female, age 91, right hemisphere 80.9
Hippocampus, CA2
nTPM: 87.2
2437 Female, age 94, left hemisphere 101.2
1892 Male, age 76, both hemispheres 93.6
1963 Male, age 80, left hemisphere 85.4
1940 Female, age 85, left hemisphere 84.2
2113 Female, age 91, right hemisphere 83.1
2249 Male, age 74, both hemispheres 76.0
Hippocampus, CA3
nTPM: 95.8
2620 Female, age 94, left hemisphere 112.4
2861 Female, age 67, both hemispheres 106.6
2137 Male, age 80, left hemisphere 100.0
1867 Male, age 76, both hemispheres 90.7
1891 Female, age 85, both hemispheres 90.7
2436 Male, age 74, both hemispheres 74.5
Parahippocampal cortex
nTPM: 94.1
2692 Male, age 74, both hemispheres 109.1
2245 Female, age 91, both hemispheres 106.5
2532 Female, age 72, left hemisphere 105.4
1850 Male, age 80, both hemispheres 99.1
2622 Female, age 67, right hemisphere 98.3
1990 Female, age 91, right hemisphere 92.0
2250 Female, age 67, right hemisphere 86.1
1933 Female, age 85, both hemispheres 84.6
2693 Female, age 94, both hemispheres 81.9
2018 Male, age 76, both hemispheres 77.6
Perirhinal gyrus
nTPM: 95.8
1794 Male, age 80, right hemisphere 107.4
1847 Female, age 91, left hemisphere 94.3
2848 Male, age 76, right hemisphere 93.3
1841 Female, age 85, right hemisphere 92.1
2521 Female, age 94, right hemisphere 91.7
Subiculum
nTPM: 99.2
2438 Female, age 94, left hemisphere 131.8
2619 Male, age 74, both hemispheres 104.5
1901 Male, age 80, both hemispheres 101.9
1977 Female, age 85, both hemispheres 90.4
2042 Male, age 76, both hemispheres 85.3
2729 Female, age 91, right hemisphere 81.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 94.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 94.6
Samples: 197

Max nTPM: 173.1
Min nTPM: 51.8
Std nTPM: 16.6
Median nTPM: 92.9
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 173.1
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 136.2
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 134.3
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 133.5
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 126.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 126.4
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 126.3
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 125.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 125.0
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 125.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 123.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 132.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 132.1
FF:10153-102I9 76 years, female 142.9
FF:10169-103B7 60 years, female 121.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 109.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 101.4
Samples: 4

Max nTPM: 122.8
Min nTPM: 74.2
Sample A Female 122.8
Sample B Female 111.1
Sample C Male 97.3
Sample D Male 74.2
Entorhinal cortex
nTPM: 109.4
Samples: 4

Max nTPM: 125.0
Min nTPM: 91.9
Sample A Female 112.5
Sample B Female 108.3
Sample C Male 125.0
Sample D Male 91.9
Subiculum
nTPM: 104.8
Samples: 4

Max nTPM: 136.2
Min nTPM: 82.1
Sample A Female 136.2
Sample B Female 98.3
Sample C Male 102.5
Sample D Male 82.1
Ventral hippocampus
nTPM: 107.3
Samples: 4

Max nTPM: 138.9
Min nTPM: 79.5
Sample A Female 90.1
Sample B Female 79.5
Sample C Male 138.9
Sample D Male 120.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 261.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 240.8
Samples: 4

Max nTPM: 254.8
Min nTPM: 230.6
Sample A Male 237.0
Sample B Male 240.7
Sample C Female 230.6
Sample D Female 254.8
Hippocampal formation
nTPM: 261.5
Samples: 4

Max nTPM: 285.6
Min nTPM: 245.2
Sample A Male 249.7
Sample B Male 265.3
Sample C Female 285.6
Sample D Female 245.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.4
68631935 Antisense, RP_050125_01_D06, Mouse strain C57BL/6J (56 days, male) 17.4

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The Human Protein Atlas

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