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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:1557.3 nTPM
HPA:1557.3 nTPM
GTEx:409.7 nTPM
FANTOM5:1073.7 Scaled Tags Per Million
Pig:1062.4 nTPM
Mouse:1741.3 nTPM
Allen mouse:7.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018122Antibody HPA027478Antibody HPA028386Antibody CAB010337
Glial cells Not detectedNot detectedLowLow
Neuronal cells Not detectedNot detectedLowLow









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 1557.3
Sample id Sample description nTPM
Hippocampus
nTPM: 1378.7
1898 Male, age 80, left hemisphere 1460.7
2621 Female, age 67, right hemisphere 1432.2
2529 Female, age 94, left hemisphere 1406.2
2148 Female, age 91, left hemisphere 1356.1
1855 Male, age 76, left hemisphere 1335.3
1911 Female, age 85, right hemisphere 1281.8
Dentate gyrus
nTPM: 1408.8
2530 Female, age 94, left hemisphere 1496.9
1927 Female, age 91, both hemispheres 1445.2
2528 Male, age 74, both hemispheres 1411.3
2531 Female, age 67, both hemispheres 1385.1
2010 Male, age 76, both hemispheres 1371.1
2246 Female, age 85, both hemispheres 1343.3
Entorhinal gyrus
nTPM: 1397.3
2764 Male, age 80, right hemisphere 1477.6
1787 Male, age 76, left hemisphere 1446.5
2613 Female, age 94, left hemisphere 1409.8
2686 Male, age 75, right hemisphere 1373.7
1938 Female, age 85, left hemisphere 1371.7
2117 Female, age 91, right hemisphere 1304.7
Hippocampus, CA1
nTPM: 1411.0
2749 Male, age 80, left hemisphere 1532.6
2527 Male, age 74, both hemispheres 1437.6
2082 Female, age 91, right hemisphere 1402.9
1873 Female, age 85, both hemispheres 1371.1
2045 Male, age 76, both hemispheres 1311.0
Hippocampus, CA2
nTPM: 1411.5
1963 Male, age 80, left hemisphere 1500.8
2437 Female, age 94, left hemisphere 1448.3
1892 Male, age 76, both hemispheres 1443.6
2249 Male, age 74, both hemispheres 1405.9
2113 Female, age 91, right hemisphere 1350.4
1940 Female, age 85, left hemisphere 1320.1
Hippocampus, CA3
nTPM: 1385.6
2436 Male, age 74, both hemispheres 1451.8
2137 Male, age 80, left hemisphere 1439.4
2861 Female, age 67, both hemispheres 1399.0
2620 Female, age 94, left hemisphere 1382.8
1867 Male, age 76, both hemispheres 1377.9
1891 Female, age 85, both hemispheres 1262.6
Parahippocampal cortex
nTPM: 1416.7
1990 Female, age 91, right hemisphere 1500.7
2250 Female, age 67, right hemisphere 1488.9
2245 Female, age 91, both hemispheres 1481.3
1850 Male, age 80, both hemispheres 1469.6
2532 Female, age 72, left hemisphere 1430.2
2693 Female, age 94, both hemispheres 1387.0
1933 Female, age 85, both hemispheres 1365.3
2018 Male, age 76, both hemispheres 1362.0
2622 Female, age 67, right hemisphere 1352.4
2692 Male, age 74, both hemispheres 1329.5
Perirhinal gyrus
nTPM: 1557.3
1847 Female, age 91, left hemisphere 1687.6
1794 Male, age 80, right hemisphere 1599.7
2521 Female, age 94, right hemisphere 1538.8
1841 Female, age 85, right hemisphere 1516.7
2848 Male, age 76, right hemisphere 1443.5
Subiculum
nTPM: 1335.4
1977 Female, age 85, both hemispheres 1424.9
2619 Male, age 74, both hemispheres 1394.9
2438 Female, age 94, left hemisphere 1365.8
1901 Male, age 80, both hemispheres 1301.2
2729 Female, age 91, right hemisphere 1281.3
2042 Male, age 76, both hemispheres 1244.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 409.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 409.7
Samples: 197

Max nTPM: 1065.1
Min nTPM: 143.7
Std nTPM: 170.9
Median nTPM: 357.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 1065.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 911.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 859.8
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 842.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 832.2
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 803.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 801.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 784.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 771.6
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 734.0
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 720.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1073.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1073.7
FF:10153-102I9 76 years, female 1090.6
FF:10169-103B7 60 years, female 1056.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 1062.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 889.3
Samples: 4

Max nTPM: 1051.3
Min nTPM: 611.3
Sample A Female 1051.3
Sample B Female 856.8
Sample C Male 1037.9
Sample D Male 611.3
Entorhinal cortex
nTPM: 729.8
Samples: 4

Max nTPM: 784.3
Min nTPM: 623.8
Sample A Female 734.7
Sample B Female 776.4
Sample C Male 784.3
Sample D Male 623.8
Subiculum
nTPM: 888.7
Samples: 4

Max nTPM: 1122.4
Min nTPM: 690.6
Sample A Female 1122.4
Sample B Female 848.8
Sample C Male 892.8
Sample D Male 690.6
Ventral hippocampus
nTPM: 1062.4
Samples: 4

Max nTPM: 1425.2
Min nTPM: 730.0
Sample A Female 1229.9
Sample B Female 730.0
Sample C Male 1425.2
Sample D Male 864.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1741.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1621.5
Samples: 4

Max nTPM: 1701.4
Min nTPM: 1568.7
Sample A Male 1568.7
Sample B Male 1573.7
Sample C Female 1701.4
Sample D Female 1642.2
Hippocampal formation
nTPM: 1741.3
Samples: 4

Max nTPM: 1777.6
Min nTPM: 1684.9
Sample A Male 1777.6
Sample B Male 1684.9
Sample C Female 1766.2
Sample D Female 1736.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.3
509 Antisense, RP_040507_01_H03, Mouse strain C57BL/6J (56 days, male) 14.5
510 Antisense, RP_040507_01_H03, Mouse strain C57BL/6J (56 days, male) 12.4
70230813 Antisense, RP_050524_04_E07, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.