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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		70.052
RNA expressioni
Consensus:9.9 nTPM
HPA:9.9 nTPM
GTEx:10.3 nTPM
FANTOM5:123.9 Scaled Tags Per Million
Pig:30.4 nTPM
Mouse:61.4 nTPM
Allen mouse:2.1 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA037543
Amygdala mean intensity 70.052
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract -
Basal medial amygdaloid nucleus 66.348
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 40.024
Cortical amygdala 70.052
Central amygdala 38.170
Medial amygdaloid nucleus 64.979

AMYGDALA - HPA Brain RNA-seq
Max nTPM 9.9
Sample id Sample description nTPM
Amygdala
nTPM: 0.0
1987 Female, age 91, left hemisphere 0.0
2514 Male, age 75, right hemisphere 0.0
2517 Female, age 94, left hemisphere 0.0
2695 Female, age 67, right hemisphere 0.0
2814 Male, age 76, right hemisphere 0.0
Basal amygdala
nTPM: 2.0
2685 Female, age 94, left hemisphere 7.3
1955 Male, age 76, both hemispheres 3.5
2243 Female, age 91, right hemisphere 1.3
2110 Male, age 80, left hemisphere 0.1
2609 Male, age 75, right hemisphere 0.0
2827 Female, age 67, right hemisphere 0.0
Central amygdala
nTPM: 0.1
2239 Male, age 80, left hemisphere 0.7
1905 Male, age 76, both hemispheres 0.0
2515 Male, age 75, right hemisphere 0.0
2701 Female, age 91, right hemisphere 0.0
2826 Female, age 94, left hemisphere 0.0
Corticomedial amygdala
nTPM: 2.2
2240 Male, age 76, both hemispheres 4.0
2829 Male, age 80, left hemisphere 3.8
2429 Female, age 94, left hemisphere 3.0
2535 Female, age 67, right hemisphere 2.2
2242 Female, age 91, right hemisphere 0.6
2428 Male, age 75, right hemisphere 0.0
Lateral amygdala
nTPM: 0.8
2534 Female, age 94, left hemisphere 3.0
2256 Male, age 80, left hemisphere 1.4
1883 Male, age 76, both hemispheres 0.8
2255 Female, age 91, right hemisphere 0.0
2516 Male, age 75, right hemisphere 0.0
2830 Female, age 67, right hemisphere 0.0
Stria terminalis, bed nucleus
nTPM: 9.9
2486 Female, age 94, both hemispheres 17.3
1974 Female, age 91, both hemispheres 10.7
2201 Male, age 74, unknown 1.6

AMYGDALA - GTEx RNA-seqi
Average nTPM 10.3
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 10.3
Samples: 152

Max nTPM: 20.9
Min nTPM: 1.3
Std nTPM: 3.4
Median nTPM: 9.8
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 20.9
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 20.3
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 19.7
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 18.4
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 17.7
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 17.0
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 16.8
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 16.6
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 16.5
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 16.2
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 16.0
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 123.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 123.9
FF:10151-102I7 76 years, female 123.9

AMYGDALA - Pig RNA-seqi
Average nTPM 30.4
Pig sample Sample description nTPM
Amygdala
nTPM: 30.5
Samples: 4

Max nTPM: 37.5
Min nTPM: 22.4
Sample A Female 37.5
Sample B Female 22.4
Sample C Male 25.5
Sample D Male 36.4

AMYGDALA - Mouse RNA-seqi
Average nTPM 61.4
Mouse sample Sample description nTPM
Amygdala
nTPM: 61.5
Samples: 4

Max nTPM: 66.3
Min nTPM: 57.9
Sample A Male 66.3
Sample B Male 57.9
Sample C Female 60.4
Sample D Female 61.2

AMYGDALA - Allen Mouse ISHi
Max Expression energy 2.1
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 2.1
71587583 Antisense, RP_050915_04_E08, Mouse strain C57BL/6J (56 days, male) 2.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.